LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy3g1470	ATGGGAAGTCAGAGATATATGGTTGCCGCCGCAGCGACAGTTAGCTTTTGTGTACTTTTGGTTCTTCTTGTTGTAGGAACAGTTAACTTCATAGATAAGAAGGGAACACAAGGTGTTATTAGACAATTGCTTGATCCAGCATCTGAATTGCTAGATGACAACACGGCAAAGGTACTATTGACCAAAAATGTAATTCATTTAAATAAAGAGGCAGAAGATCTCCATTTATGCGTTCGACAAGAATTGCCTGTTAACTTCAATACAATTGGTTCAGACATTCGACCATTAACACAAGCAGACATAAAAAATTTGATTAAGCTTTGCCATTATCAGTTCAAGGAAAAGTGTGTCTATTGTTTGAGAAAAAATAATCTTCCATTACTGCCATCGAGGGAAGATGATGATGATTCCAAGATTTGGCATGCTGCATATAGGGCACTGCATTTTTCTGGATCTAGTGCTTCCAGACAAAACTTGGGTCGAGTTTTGCTTCAGCAGATATCAGAAGCACCTAGTCCAGGACCAGCTGTTGGATCACCAACACCGAGTCTTGCACCAACCCCTGGACCCAGTTTAGCACCCTTATCCGGACCTAGTCCAGCACCATCCCCTGGACCTGGTCTGGCCCCATCGTCTGCTCCGGTACCTGTTGATTCTAGACCTCTGCATCCTCCTTTGTCACCATTTTTTCCTAAACTGACACCACCAACAACATCAAATGCAGATGTTTCTGCTCCTCCGTCATCGGACGCTAATAAAACCGAAGATAAGCATAGTAATAAGAAAACAGTTGTTATTGCTGTAGTTATAACTGCACTGGTGACATTGATAGGAGCAGCACTGCTCTTTATGTTCTGTGGTCGGTTTTCGAAGATTGGCCAAGGTAGAAAAAATGATGAGAGGCCACTTCTCAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTATGGATTTGGAAATTCAATGAAAGGGGAGAAACTTGGGTTCCAATCATCAAGTAATAATTTGGTTGACAACAAGAAGCCCCAGGTTCTAGAAAGTCAATCAATAGGAGCTTTTAGTGCTGCTTCGGGATCACCATTTGAAGTAAAAACTCATTCCCAATGGACAGGAACCATGCCTTCTGGAATGCCTCCTTTAAAACCTCCACCTGGCAGGCTGAATCCTCTCCCCCCTGAGCCTCCTTCGTTTAGGCCTTCTGGTAATGCTGCCGCTGCCCCTGCCGCTGCCCCTGCCCCTGCCCTGGCTACTCATGGACCACAACAGGTTGGTGTTGGTGGTGCTCCACGTCCTGGACCTCCACCACCACCACACCCAGCACCAGTTGGTGCCCAACATTCTCCTCCCTTCCCACCACCCCCAGCATTGGCTGCTGCCAGAGCTCATCCTCCACCACCACCTCCTGCACCAGTTGGGGCCAGACCTAGTCCTCCACCACCACTTCCCCCTACATCAACAGGTGCGAAACCTAGTCCTCCTCCACCTCCCCCAGCTCCAGCTGGTGCCAAACCTGGTCCTCGCCCTCCGCCACCTCCTAAGGGTGGTATACCTCCTCCTCGCCCACCTCCAATCGGGGCTAGCAAACCAAAAGCTACGGAGAACGTTGAAGCTGGCGCAAGTGAAGCTGATGCTCCTAAAGCCAAGCTAAAGCCATTTTTCTGGGATAAGGTTCAAGCTAACTCTGATCAATCAATGGTTTGGAATCAAATCAAGTCTGGATCATTCCAGTTTAATGAGGAGATGATAGAAACACTTTTTGGTTATAACGCTGTGGATAAAAACAATGGTCAACGAGGGAAAGAGTCTTCTGCCCAAGACCCTTCACCTCAGTATATCCAGATCATTGACAAAAAGAAAGCACAGAATTTATTAATTCTGTTGCGAGCATTGAACATGACAATGGAAGAAGTATGTGATGCACTTTACGAAGGAAATGAGCTACCTGCTGAGTTCCTCCAAACCTTGCTGAAGATGGCACCGACGACTGATGAACAACTTAAGCTTAGACTTTTTACTGGTGAGCTATCTCAACTTGGCCCTGCTGATCAGTTCTTGAAAGCGATGGTTGACATTCCATTTGCTTTTAAGCGAATGGAAGCACTTCTTTTCATGAGTACACTTAAAGAGGAGCTCAATTCTACTATCGAGTCTTTTGCAGTTCTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAGCTTGATACACTCCTGAAACTATCTGATGTAAAAGGAACAGATGGCAAGACCACACTCTTACACTTTGTTGTTCAGGAGATTATCCGTTCTGAAGGCATAAAAGCTGCCAGGCTGGCAAATGTGAGTGATCTTAAAGATAGCTCTAGTGAAACAGAAGATCGCTACCGTGACATTGGCCTTCAGGTGGTTTCGCACTTGAGTAGCGAACTTGAGAATGTCAAGAGAGCAGCAATTCTAGATGCCGACACCTTAACTGGAACTACTGCCAAACTTGGCCATGGTCTCATGAAAACCAAAGATTTGTTAAACAAAGATCTGAAGAATGTGGAGGAAGATAGAGGGTTTAGTGACACAATTAGACGTTTCGTGCAGAATGCTGAAACTGATGTCGTGAGACTTCTGGAAGAAGAGAAGAGAGTCATGGCTCTGGTAAAGAGCACTGGTGATTACTTTCATGGGAAGGCCGGCAAGGACGAAGGCTTACGGTTGTTTGTAATAGTAAGAGACTTCTTAATAATGGTGGACAAGGCATGCAAGCAGGTGAGAGATGCACAGAAGAAGCCTGCGAAATCTCAAAAACAAGAGACATCTCAAGGATCATCTTCCTCGGAGACTCGTCCGCCACCTTCTGATTTTCGTCAGCGGCTCTTTCCAGCAATTGCTGAAAGGAGGATAGGTGACAGTAGTTCGGACGAAGAGAGTCCATAG	2997	0.4588	MGSQRYMVAAAATVSFCVLLVLLVVGTVNFIDKKGTQGVIRQLLDPASELLDDNTAKVLLTKNVIHLNKEAEDLHLCVRQELPVNFNTIGSDIRPLTQADIKNLIKLCHYQFKEKCVYCLRKNNLPLLPSREDDDDSKIWHAAYRALHFSGSSASRQNLGRVLLQQISEAPSPGPAVGSPTPSLAPTPGPSLAPLSGPSPAPSPGPGLAPSSAPVPVDSRPLHPPLSPFFPKLTPPTTSNADVSAPPSSDANKTEDKHSNKKTVVIAVVITALVTLIGAALLFMFCGRFSKIGQGRKNDERPLLSLSMSDYSVGPSSYGFGNSMKGEKLGFQSSSNNLVDNKKPQVLESQSIGAFSAASGSPFEVKTHSQWTGTMPSGMPPLKPPPGRLNPLPPEPPSFRPSGNAAAAPAAAPAPALATHGPQQVGVGGAPRPGPPPPPHPAPVGAQHSPPFPPPPALAAARAHPPPPPPAPVGARPSPPPPLPPTSTGAKPSPPPPPPAPAGAKPGPRPPPPPKGGIPPPRPPPIGASKPKATENVEAGASEADAPKAKLKPFFWDKVQANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQRGKESSAQDPSPQYIQIIDKKKAQNLLILLRALNMTMEEVCDALYEGNELPAEFLQTLLKMAPTTDEQLKLRLFTGELSQLGPADQFLKAMVDIPFAFKRMEALLFMSTLKEELNSTIESFAVLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARLANVSDLKDSSSETEDRYRDIGLQVVSHLSSELENVKRAAILDADTLTGTTAKLGHGLMKTKDLLNKDLKNVEEDRGFSDTIRRFVQNAETDVVRLLEEEKRVMALVKSTGDYFHGKAGKDEGLRLFVIVRDFLIMVDKACKQVRDAQKKPAKSQKQETSQGSSSSETRPPPSDFRQRLFPAIAERRIGDSSSDEESP*	999

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	175	232	-	-
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	945	998	-	-
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	980	998	-	-
	Ahy3g1470	998	SMART	it6_source	541	952	IPR015425	-
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	429	528	-	-
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	365	545	-	-
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	170	259	-	-
	Ahy3g1470	998	Pfam	Formin Homology 2 Domain	543	937	IPR015425	-
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	954	972	-	-
	Ahy3g1470	998	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	611	961	-	-
	Ahy3g1470	998	PANTHER	FORMIN-RELATED	1	996	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Ahy3g1470	998	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	541	963	IPR015425	-
	Ahy3g1470	998	PANTHER	FORMIN-LIKE PROTEIN	1	996	-	-
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	233	250	-	-
	Ahy3g1470	998	MobiDBLite	consensus disorder prediction	378	400	-	-
	Ahy3g1470	998	Gene3D	Formin, FH2 domain	546	969	IPR042201	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy3g1470	Ahy-Chr3	25709837	25716355	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy3g1470	244	988	FH2 protein (formin) Gene Family	AT5G54650	51.605	0.0	638

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy3g1470	-		-	ccaj:109810281	760.755