Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1420 ATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATTTATCGAGGGAGCGTTTTTTTCTGAATCTGATATGTCAGATTATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACATCTTTGAAATTTAGTGAGAATGTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCATCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAAACCTTCAAGAATAGTAGTGGCGAGATTTACAGACAAATGTTTGTATGCCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATCAGCACCTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTAACGATTCAAGAGGTTTGTTACGTAATTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCGACTCTTCGGGGATGTTATTGCTTTTGATGCTACGTACAAGAAGAACAAGTATAGTTGTCCATTAGTAATATTCAGCGGGGTTAACCACCACAACCAAACAATTATTTTTGCTGCTGCGTTAATTGCGGACGAAACTACTGATACATATATTTGGCTCCTGCGTCAGCTCATGTTTGCAATGAGGGGCAAGACCCCGACCTCAATCATAACTGATGGGGCCATGGCGATTAGGAATGCAGTGAGAGTTGTATTTCCCGAAGTCAGACATAGATTATGCGCTTGGCACCTTATTCGAAATACAACTAGCAATGTTGGAAATCCATCGTTTACATCTAAATTTAGAAAAATCATGACAGGAGACTACGAGATTCCCGTGTTTAAGCATAAGTGGGTTCAGCTTATTGAAGAATTTGGCATTGAGGATAAGCCGTGGGTGATCAATGACAAACCCCAATTTGACGGTTTATCTTGTATTGATTTTAGGGGATTTTATAACCTTTCACCCACATTTATTCAATGA 1341 0.4042 MDEQNEFEQDFRDEFIEGAFFSESDMSDYILEAAYAVDSVQDITSLKFSENVAEEIGKYHFSTLHLAFDFYMKYSKSKGFSARKSKTFKNSSGEIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNHDLLDTQFSAMLPAHRKMSEADIMQMMNMLKSGISTSQIFGLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACNDSRGLLRNLFWSDGISQLDYRLFGDVIAFDATYKKNKYSCPLVIFSGVNHHNQTIIFAAALIADETTDTYIWLLRQLMFAMRGKTPTSIITDGAMAIRNAVRVVFPEVRHRLCAWHLIRNTTSNVGNPSFTSKFRKIMTGDYEIPVFKHKWVQLIEEFGIEDKPWVINDKPQFDGLSCIDFRGFYNLSPTFIQ* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1420 446 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Ahy3g1420 446 PANTHER OS02G0262500 PROTEIN 56 418 - -
Ahy3g1420 446 Pfam MULE transposase domain 279 373 IPR018289 -
Ahy3g1420 446 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 418 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1420 Ahy-Chr3 24158656 24169109 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1420 MULE 1.10E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1420 - - ahf:112720852 820.846