Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1397 ATGCGTCCACCATTTAGGAGTAGGGTCAGGTTTCAAATAGGGCAGAAAGTGGAGGTGTGTGGTAAAGAAGAAGGGTTTTTTGGTTCTTATTATGAAGCCACCATTGTTTCATGCGTTGGTAATAGCTGCTACCTTGTCCAATATAAAAACCTTCTAAGTGCTACTGAGCCTAATAAGCCTCTCGTTGAGATGGTGAAACTTAAGGACCTTCGCCCTATTCCATCCGAAGATCTTGGATCTCATGAATTCATTGTTAATCAAAATGTTGATGTATTTGACAATGATGGTTGGTGGGTTGGAAAAATTACCAGTAAGAGGGGTTCCAGATATTCTGTGTATTTTTCCTCCACAAATGAGGAGATTGTTTATCCTTCTTCCCAAATTAGGGTTCACCTAGATTGGATTGATGGGTCGTGGGTATATCAGGATGGAAATCAACAATGA 444 0.4032 MRPPFRSRVRFQIGQKVEVCGKEEGFFGSYYEATIVSCVGNSCYLVQYKNLLSATEPNKPLVEMVKLKDLRPIPSEDLGSHEFIVNQNVDVFDNDGWWVGKITSKRGSRYSVYFSSTNEEIVYPSSQIRVHLDWIDGSWVYQDGNQQ* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1397 147 SMART agenet_At_2 9 78 IPR014002 -
Ahy3g1397 147 SMART agenet_At_2 81 136 IPR014002 -
Ahy3g1397 147 PANTHER - 8 143 - -
Ahy3g1397 147 Pfam Agenet domain 14 74 IPR008395 -
Ahy3g1397 147 Pfam Agenet domain 87 130 IPR008395 -
Ahy3g1397 147 Gene3D - 1 83 - -
Ahy3g1397 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1397 Ahy-Chr3 23432840 23433710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1397 23 143 PHD Transcription Factor Family AT5G58610 28.000 2.59e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1397 - - adu:107478234 305.834