Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1380 ATGGAATCGCATTTCTTCCTCCTCCGATGTTTTCTCCTCCTAGCTTCTGCCGCATGTTCTCTTTCCCACCCTTCTCTCCTCGGTGTTCACCCTCTAGATGAGAAATATTACAGCTCTGAGGTAATCAAGTGCAAGGATGGATCAAAATCCTTCTCCAAAGATCGTCTCAATGACAATTTCTGCGATTGCCCTGATGGCACTGATGAACCAGGAACTTCAGCTTGCTCGGCTGGAAAATTTTATTGCAGAAACCTGGGAAGCAAGCCACAATTTATATTCTCTTCTCATGTTAATGATCTTTTCTGTGATTGTTGTGATGGGAGTGATGAATATGATGGACACATTCGGTGCCTCAACACTTGTGTAATGGGTGGGAATGCCGAAATTGGCAATTACAATTCAAAACTGAGTCAGCAGGCCTCTTTTGCTGGAAAAGTGACCAAAGATGAAGTGAAGTATGAGGACTTGGTTCATAATCTTATGAGTTTGAGGTTAGCAATTATTCTACAAGTGGTTCTGCTTGCTTTTATCGTATTTCTATGGCGTTTTGGTTGCCGTTCCAGATCTAAAAGGAGGCGTACAATTGAACTGAAGGAGATCTAG 603 0.4245 MESHFFLLRCFLLLASAACSLSHPSLLGVHPLDEKYYSSEVIKCKDGSKSFSKDRLNDNFCDCPDGTDEPGTSACSAGKFYCRNLGSKPQFIFSSHVNDLFCDCCDGSDEYDGHIRCLNTCVMGGNAEIGNYNSKLSQQASFAGKVTKDEVKYEDLVHNLMSLRLAIILQVVLLAFIVFLWRFGCRSRSKRRRTIELKEI* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1380 200 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 14 193 IPR039794 -
Ahy3g1380 200 Pfam Glucosidase II beta subunit-like 15 123 IPR028146 -
Ahy3g1380 200 PANTHER EXPRESSED PROTEIN 14 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1380 Ahy-Chr3 22833698 22837640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1380 17 136 Calmodulin-binding Proteins AT5G56360 61.983 1.96e-46 159