Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1379 ATGCATAACAATTACCGAAGGATGCAAAGAAATAACAACGGAATGCATCCAGCATGTGCGGCATGCAAACATCAAAGGAAGAAATGCAGTGAGAATAATTGCATATTAGCCCCTTATTTTCCAGCAAATAGAAGCCGTGAGTTCCATGCAGTGCACAAAGTTTTTGGTGTTAGCAACATAACTAAGTTAGTGAAGAGTGCAAAGGAAGAAGACCGAAGAAGAGTTGTTGACTCATTAATTTGGGAAGCATGTTGTAGGCAAAGAGACCCTATTCATGGTCCTTATGGAGAGTACACAAAAGTTTACAATGAGTATAAGAAAGTGTTCAATGAACTTAAGATATTTAGGGGCCAAAATACTAATACTAATACTAATACTAATAATAATCATCATCATCAACTATTGCAAATGCCGTTACCATCATCTCATCATCAAGGACTAAAATCCGTACAAGATTTGATTATATGCAATAATAATAATAATAATAATACTAATAATGGGAATAAAGGGAAACACAAAGGTGAAGAAGTTGATAGTAATAATACTAATAATAACAATAATGGTAATAACAACTCATTGGAATATCATCATGTTCATCATGATGAGAACAAGAATGAGATTATGGACTCTTCTACTACTATTTATAATGCATATTGTTCAAATTATTTGCATGATTTGGATAATATGATGAGGCAGGAGGTAGTCATCCCCTTTCAGCAGCACTCTCAAACATACTATATTACAGGTAATCAATTCAATCGTTGA 765 0.3346 MHNNYRRMQRNNNGMHPACAACKHQRKKCSENNCILAPYFPANRSREFHAVHKVFGVSNITKLVKSAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVFNELKIFRGQNTNTNTNTNNNHHHQLLQMPLPSSHHQGLKSVQDLIICNNNNNNNTNNGNKGKHKGEEVDSNNTNNNNNGNNNSLEYHHVHHDENKNEIMDSSTTIYNAYCSNYLHDLDNMMRQEVVIPFQQHSQTYYITGNQFNR* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1379 254 Pfam Lateral organ boundaries (LOB) domain 18 114 IPR004883 -
Ahy3g1379 254 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
Ahy3g1379 254 MobiDBLite consensus disorder prediction 179 193 - -
Ahy3g1379 254 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 9 249 - -
Ahy3g1379 254 MobiDBLite consensus disorder prediction 158 193 - -
Ahy3g1379 254 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1379 Ahy-Chr3 22829114 22831747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1379 16 106 AS2 family AT1G06280 61.538 1.35e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy3g1379 LOB 1.10E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1379 - - ahf:112769909 478.789