Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1378 ATGGCTTTTCCTTCAAAAACCGAACCAAACCGCACCGCGAACACCCCTATAATTAATGCTGATGGTTTTGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTGGTGTTTGATATAGAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCAAGTGCTATGGATTTGTGTCTCAAAAAGACTTGAAAATGGTGGATGCCAATGGCAACATTAATACAAGACAGTTGGTTTGCAATAAAATAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAGCATAGGGCAATTACTCGTGTCAACTGCAGGGCGAGGATTCGGTTCATTCGTCACTATAGAACGGGTAAGTGGAAAGTCAGTGTCTTTGAGAGTGAACACAATCATCTACTGTGTCCACCTAAGTACAGACATCTTATTGCCGCAAATCGTGGGCTTAATGAGGCCGATAAAACACAAGCAGACAGCTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTTCCAAAAAGGTGTATATGATAAAGTGGGTTTTACCAGCAAAGACTTACATAACCACATTAGTAAGATTAGGCGTGGCAAAGTGAAAGTCAGTGATGTATTTGCTGCGTTGGCCTATCTGTTGTCCAAGGCAGACAGTGACCCGTTATTTCTAGGAAAGTTCACCTTAAATGATGGTAGGTTGGATAATTTGGTGTGGGCTGATGGAGCAAGCATTGTTGATTACGAATGTTTTGGCGATGTACTCGCTTTTGAAACCACTTACAAGAAAAATGTGTATAACAAGCCCTTAGTCATATTTTTAGGGACCAACATCTATGGCCAAACAACTATCTTTGGTTGGGCCCTACTCTCAGATGAAAGGTCCGAAACTTTCAAGTTGGTACTGAAGGAATTTTTGAAAATCATGTCAGGAAAACTACCCGGAGGCGTTGTGATAGACAGAGACCGTGCTATGAGAGAGGCTATCTTAGAAGTATTTCCTGGTATACCACATCGTTTTACCGTACAAATATTTGAAGAGAGATGGAATGAGATCATATCCAAATACGGATTTGCCGATAATAAATGGGTCCAGGGCATTTATAATGACAAAATGAAGTGGGCTAACGCATATTTGAGGGAGCACTTCTTTGGTCGCATAAGAATTACATCACAGTGTGAGGGAATTCATTCATTATTGAAGAACTATCTTCCTGTTTTGACTACGTGCTTGGAAATTTTTGAGAAACAAGCTACTGAATTCTATGCTAAAAATATTTTCAAACTTGTGAAAGATGAGATAGAAGCAGCAGGTGCCTTAAATGTGACTGAATGCCCAAACAGTGGAGACATTGTTGAGTACAACACGACTTTATTGCCCACTTTTCACATAAAGGAAAATAAGCTAAACAGTGTGAAAGACCATCAACATGATAGGCATCTCACTGATCATGAGATATATTTTATTGTTGCTATTCTTGGCCTGCTTGTAAACTTGGTAGAGAAGGATGGCCATAATAGATCACGGCTTGCAGTAGCCAGTGTTCTGCTACCATGCTCAGATGTCTTAGACCATGAGATTCAGAAGGATATACTTGAACCATTTAGATATAAGTTGTGTGATCTAGACTATAATGGTTGGGGAGAAGGGTATGAAGTTTGA 1677 0.3995 MAFPSKTEPNRTANTPIINADGFEKLITDLTIEDIWGLVFDIESQVCEFYAKYAKCYGFVSQKDLKMVDANGNINTRQLVCNKIGERHWKHLKRDNRQREHRAITRVNCRARIRFIRHYRTGKWKVSVFESEHNHLLCPPKYRHLIAANRGLNEADKTQADSLRACGVKTCHIMGYMVFQKGVYDKVGFTSKDLHNHISKIRRGKVKVSDVFAALAYLLSKADSDPLFLGKFTLNDGRLDNLVWADGASIVDYECFGDVLAFETTYKKNVYNKPLVIFLGTNIYGQTTIFGWALLSDERSETFKLVLKEFLKIMSGKLPGGVVIDRDRAMREAILEVFPGIPHRFTVQIFEERWNEIISKYGFADNKWVQGIYNDKMKWANAYLREHFFGRIRITSQCEGIHSLLKNYLPVLTTCLEIFEKQATEFYAKNIFKLVKDEIEAAGALNVTECPNSGDIVEYNTTLLPTFHIKENKLNSVKDHQHDRHLTDHEIYFIVAILGLLVNLVEKDGHNRSRLAVASVLLPCSDVLDHEIQKDILEPFRYKLCDLDYNGWGEGYEV* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1378 558 Pfam FAR1 DNA-binding domain 48 138 IPR004330 -
Ahy3g1378 558 Gene3D - 395 547 IPR011989 -
Ahy3g1378 558 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 347 IPR031052 GO:0006355
Ahy3g1378 558 PANTHER OS03G0181600 PROTEIN 350 419 - -
Ahy3g1378 558 Pfam MULE transposase domain 259 345 IPR018289 -
Ahy3g1378 558 PANTHER OS03G0181600 PROTEIN 37 347 - -
Ahy3g1378 558 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 350 419 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1378 Ahy-Chr3 22810321 22820053 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1378 MULE 6.20E-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1378 - - adu:107478190 939.102