Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1371 ATGGCATTTGTGATAAATTTGAACACGCAGCCGTCGTCAGAAGAAATTCACTCATTTGATACCCATATTGATATGAACGATACAAATATTTGTAATAGTTCAAGCAATTCTGCTACAGAAACCGAGTGCACGAATGAGGTCCTAATTCATCCCACCATTTCTGATGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCAAAGAAGCACGTCAATTTTACTACAACTATGCCAATAAAGTGGGATTTGAGCCTCATATAAGAAACACTAACTTCGACAAGAATGGAAGGACACCCATTAACCAATCCATACAGTGCAATAGAGATGGAAACCGAACAAAGAAGAATCTGGTAACCCAAAGGTCAAACACAGTCTCATCTGTACACTGTAAAGCTCACATCTATGTGAAACTTGACACAGTGCTTGGAAAATGA 438 0.3927 MAFVINLNTQPSSEEIHSFDTHIDMNDTNICNSSSNSATETECTNEVLIHPTISDEEIPKVGMLFGTLKEARQFYYNYANKVGFEPHIRNTNFDKNGRTPINQSIQCNRDGNRTKKNLVTQRSNTVSSVHCKAHIYVKLDTVLGK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1371 145 Pfam FAR1 DNA-binding domain 73 141 IPR004330 -
Ahy3g1371 145 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1371 Ahy-Chr3 22703481 22704185 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1371 FAR1 3.60E-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1371 - - ahf:112774693 300.827