Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1366 ATGAAAACAAACATATATATCAATACACTTCTGGTTCAGGTAGCAATACTAATGGAATCCAATGGTGTAGACCATGCTTCCAAATTGCTTGAATCTCAAAGCCATGTATGGAACCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGACTTAGGAATTCCAGATGCCATACACAACCATGGCCAACCCATGCCACTCTCAAAACTCATTTCTTCTCTACAAATCCATCCCAACAAAACACAATCCATCCATCGCTTGATGCGAATTTTGACTCATTCTGGCTTTTTCTCTAAACAAATCTCTTCCAAAGGCGATCCAGAATCGAGTTATTCCCTAACCGATGCATCTAAGTTGTTGCTCAAAGACAATCCTATGAGTCTTTTTCCTTTCTTGTCTGCCATGCTTGATCCCATTTTAACAAAACCGTGGTACGATTTACCGGCATGGTTCAAAAACGATAGTCCCACATCGTTTTACATGAGGCATGGGATGGCACTTTGGGAATATGCTGGTATTGAGCCAAGACTCAATAAGTTCTTCAATGATGCCATGGAAACCGATACTCCATTTGTTTCAAGTATTTTGTTTGACAAGTGTAAGGGTGTGTTTGAAGGGTTGGATTCTTTGGTTGATGTGGGTGGAGGCACAGGAACTATGACTAAGGCTCTTGCTAAGGCGTTTCCACAAATAGAGTGTGTTGTGTTTGATCTTCCACATGTTGTTCATGGCTTGCAAGGAACTGGGAATCTCAAATATGTTGGAGGTGATATGTTTGACTCAATTCCTCCTTCAGATGCCATTTTCTTGAAGTTTATATTGCATGACTGGAATGATGAGAAATGTATCAAAATACTGAAGAACTGCAAAGAAGCAATCACAAGAAGCAAAGGAAGAAAAGGAAAAGTTATTGTCATTGATATGGTAGTGGATGATGAAAAGAGTGATGGAGATAATAAATCAATTGAAACCCAACTTTTCTTTGATATGTTGATGATGGTAGAAGTCAACGGAAAAGAGAGAAATGAAAAAGAATGGGCAAACTTAATTTTCTCAGCTGGTTTTAGTAGCTACAAGATAAACTTATCAGCTTTGGGATTAAGATCTCTCATTGAAATCTTTCCATAA 1137 0.3835 MKTNIYINTLLVQVAILMESNGVDHASKLLESQSHVWNHIFSFINSMSLKCAIDLGIPDAIHNHGQPMPLSKLISSLQIHPNKTQSIHRLMRILTHSGFFSKQISSKGDPESSYSLTDASKLLLKDNPMSLFPFLSAMLDPILTKPWYDLPAWFKNDSPTSFYMRHGMALWEYAGIEPRLNKFFNDAMETDTPFVSSILFDKCKGVFEGLDSLVDVGGGTGTMTKALAKAFPQIECVVFDLPHVVHGLQGTGNLKYVGGDMFDSIPPSDAIFLKFILHDWNDEKCIKILKNCKEAITRSKGRKGKVIVIDMVVDDEKSDGDNKSIETQLFFDMLMMVEVNGKERNEKEWANLIFSAGFSSYKINLSALGLRSLIEIFP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1366 378 SUPERFAMILY "Winged helix" DNA-binding domain 27 128 IPR036390 -
Ahy3g1366 378 PIRSF O-mtase 14 378 IPR016461 GO:0008168
Ahy3g1366 378 Gene3D - 18 123 IPR036388 -
Ahy3g1366 378 CDD AdoMet_MTases 213 309 - -
Ahy3g1366 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 378 IPR016461 GO:0008168
Ahy3g1366 378 PANTHER ORCINOL O-METHYLTRANSFERASE 22 378 - -
Ahy3g1366 378 Pfam O-methyltransferase domain 147 359 IPR001077 GO:0008171
Ahy3g1366 378 Gene3D Vaccinia Virus protein VP39 124 378 IPR029063 -
Ahy3g1366 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 368 IPR029063 -
Ahy3g1366 378 PANTHER O-METHYLTRANSFERASE 22 378 IPR016461 GO:0008168
Ahy3g1366 378 Pfam Dimerisation domain 47 95 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1366 Ahy-Chr3 22527717 22530082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1366 47 377 Monolignol Biosynthesis Gene Families AT5G54160 34.125 1.40e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1366 - K16040 gmx:100781008 507.294