Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1365 ATGGAATCGAATGGTGTAGACTATGCTTCCAAACTGCTTGAATCTCAAAGCCATGTATGGCACCAGATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGACTTGGGAATTCCAGATGCCATACACAACCATGGCCAACCCATGCCACTCTCAAAACTCATTTCTTCTCTACAAATCCATCCCAACAAAACACAATTCATCCACCGCTTGATGCGAATTTTGACTCATTCTGGCTTTTTCTCTAAACAAATCTCTTCCAAAGGCGATCCAGAATCGAGTTATGCCCTAACCGACGCATCCATGTTGTTGCTTAAAGACAACCCCATGAGTCTTTTCCCTTACTTGTCCGCCGTATTTGATCCAATTTTAACAAAGCCGTGGTGCGAGTTGCCAGCATGGTTCAAAAATGATAGTCCCACACCGTTCTACATGACACATGGGATGGCACTTTGGGAATATGCTGGCGTTGACCCAAGACTCAATAAGCTCTTCAATGATGCCATGGAAACCGATACTCCATTTGTTTCAAGTATTTTGTTTGACAAGTGTAAGGGTGTGTTTGAAGGGTTGGAGTCTTTGGTTGATGTGGGTGGAGGCACAGGAACTATGACTAAGGCTCTTGCTAAGGCGTTTCCACAAATGGAGTGTGTTGTGTTTGATCTTCCACATGTTGTTCATGGCTTGCAAGGAACTGGGAATCTCAAATATGTTGGAGGTGACATGTTTCACTCAATTCCTCCTTCAGATGCCATTTTCTTGAAGTATATATTGCATGACTGGAATGACGAGAAATGTATCAAAATACTGAAGAAATGCAAGGAAGCAATTATCACAAGAAGCAAGGGAAGAAAAGGAAAAGTTATTGTCATTGATATGGTAGTGAGTGATGAAAAGAGTGATAAAGATATTGAATCAATTGAAACCCAACTTTTCTTTGATATGTTCATGATGGTAGAAGTCGACGGAAAAGAGAGAAATGAAAAAGAATGGGCAAACTTAATTTTTTCAGCTGGTTTTAGTAGCTACAAGATAAACTTATCAGCTTTGGGATTAAGATCTCTCATTGAAATCTTTCTATAA 1089 0.4004 MESNGVDYASKLLESQSHVWHQIFSFINSMSLKCAIDLGIPDAIHNHGQPMPLSKLISSLQIHPNKTQFIHRLMRILTHSGFFSKQISSKGDPESSYALTDASMLLLKDNPMSLFPYLSAVFDPILTKPWCELPAWFKNDSPTPFYMTHGMALWEYAGVDPRLNKLFNDAMETDTPFVSSILFDKCKGVFEGLESLVDVGGGTGTMTKALAKAFPQMECVVFDLPHVVHGLQGTGNLKYVGGDMFHSIPPSDAIFLKYILHDWNDEKCIKILKKCKEAIITRSKGRKGKVIVIDMVVSDEKSDKDIESIETQLFFDMFMMVEVDGKERNEKEWANLIFSAGFSSYKINLSALGLRSLIEIFL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1365 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 362 IPR016461 GO:0008168
Ahy3g1365 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Ahy3g1365 362 Pfam O-methyltransferase domain 130 343 IPR001077 GO:0008171
Ahy3g1365 362 PANTHER ORCINOL O-METHYLTRANSFERASE 7 361 - -
Ahy3g1365 362 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Ahy3g1365 362 Gene3D Vaccinia Virus protein VP39 107 361 IPR029063 -
Ahy3g1365 362 PANTHER O-METHYLTRANSFERASE 7 361 IPR016461 GO:0008168
Ahy3g1365 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Ahy3g1365 362 Gene3D - 2 106 IPR036388 -
Ahy3g1365 362 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1365 Ahy-Chr3 22402752 22413674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1365 30 361 Monolignol Biosynthesis Gene Families AT5G54160 34.320 9.90e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1365 - K16040 gmx:100781008 489.574