Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1359 ATGAGTGAGTCCAATGAACATGAAAACAATCATGGCAACATCATAGTGGAGGGAAGAAAAGACAGTTTAATTAGAACTTGTCCAACATGTGGTCATCACATCAAATGCCAAGATCAGGGTGGTGGAATTCATGACTTACCTGGACTTCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGCGATCTGATATTCACAAGCTTCACCCTTTAATTGATGAGTTCATCCCAACTCTTGAAGGAGAGAATGGAATCTGCTATACTCATCCAGAGAACTTGCCAGGAGTAAGCAAGGATGGATTGATCCGGCACTTCTTCCACCGGCCGTCGAAAGCATACACAACCGGAACAAGGAAGAGAAGGAAGGTGAACTCGGACGAAGAGGGAAATGAAACCCGTTGGCACAAAACAGGGAAGACCAGACCAGTCTATATTAGGGGGAAGCTGAAAGGATACAAGAAAATCCTTGTTCTCTACACAAACTATGGTGGGAAGCAAAGGAAGCCAGAGAAAACCAATTGGGTGATGCACCAATACCACCTTGGCAATGATGAAGAGGAGAAAGAAGGAGAGTTGGTTGTTTCCAAAGTGTTCTACCAAACACATCCTAGACAATGTTCTTCACTCTTGATCAATAACAACAAAGACTCTTCAACAGCCGCACTTGTCAAGGATAATAATAATAACGGGTTTGTTGAGTATTACCATTCAAATTTCATATCATTTGATCAAGGGGAACACCAACATAGGTCTAGTGGGGCTCAAGTCGTCATTTCACATTTCCCTCTCCATGAAGGTGCTCCTAATTATCATTCTTTGAATCGAAAGGAGTAG 861 0.4239 MSESNEHENNHGNIIVEGRKDSLIRTCPTCGHHIKCQDQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPENLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVNSDEEGNETRWHKTGKTRPVYIRGKLKGYKKILVLYTNYGGKQRKPEKTNWVMHQYHLGNDEEEKEGELVVSKVFYQTHPRQCSSLLINNNKDSSTAALVKDNNNNGFVEYYHSNFISFDQGEHQHRSSGAQVVISHFPLHEGAPNYHSLNRKE* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1359 286 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 277 - -
Ahy3g1359 286 ProSiteProfiles NAC domain profile. 49 209 IPR003441 GO:0003677|GO:0006355
Ahy3g1359 286 MobiDBLite consensus disorder prediction 128 144 - -
Ahy3g1359 286 Gene3D NAC domain 58 213 IPR036093 GO:0003677|GO:0006355
Ahy3g1359 286 SUPERFAMILY NAC domain 44 209 IPR036093 GO:0003677|GO:0006355
Ahy3g1359 286 MobiDBLite consensus disorder prediction 123 144 - -
Ahy3g1359 286 Pfam No apical meristem (NAM) protein 50 190 IPR003441 GO:0003677|GO:0006355
Ahy3g1359 286 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 277 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1359 Ahy-Chr3 22261278 22265983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1359 25 234 NAC Transcription Factor Family AT4G28500 74.882 7.71e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy3g1359 NAM 2.50E-22 No_clan