Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1358 ATGACGTCAGTCAAGGTCCTTCATTTAGCATACAACTCCTTTGCGCCGAGTCAGCTCCCAAGTCAACTCGTCCAACTCGCTAACCTCAAGGAACTCTGGCTCTCGGGTTGCAACCTCATAGGTCCAATCCCGAATTCCATTGGGAACCTCACGTGCCTCGAGAATCTCGACCTCTCGAAGAACAAACTCACCGGAGAGATACCGGAATCGTTTTCGGGGTTGAATAGCATAACAACAGTCTCGAAGATCATCAACGTCTCTTTTAACCGTTTTTCTGGTGAGTTGCCGGCGGGTTTGTGCCCGTGGGGAAAGTTGGAGGAGTTGCTCATGTTGTTCAATTCTTTTTCCTGGAAAATTTCGGAGAGCCTCGGAAACTGCATGAGCCTGAGGAGGGTTAGAATTGGGAACAATAACTTTTCTGGAAAGGTACCTGATGCACTTTGGGGTTTGCCTCATTTGCATTTACTCGAGCTTAATTCTGATTCATTGTCTGGTTCAGTTTCAAATTTGATATCCCTTGCTTATAATCTGTCTGATTTGAGGATTTCGGATAACCAGTTTAGTGGGTTAATTCCTGATGGAATTGGATCATTGAATAACCTTTTGGAGTTTCATGGTGGTAATAATAAGCTTTCTGGTAGAATCCCTGATAGCATGGCCAAATTGATCCAGTTGGGTACTCTTGATTTGAGCTATAATGAAATGTCTAGTGAAATTGAAACCCTGAGCTTTGTGTTAAAGGATTTGGGAAATGTCATAGCTCAAGGGGGAGAAAGTACCGGAGGTATGCATGGATTTTCTGCATGGATTTTCAGGTCCATATTTGCACTTGCTAGAATCTTGTTCATCCTTGGGGTGGCTGTGTTTTATGTGAGATATAGGAACTTAAGAAAGAAGAAGAGAAGTTTAAATGTTTCAAAGTGGAGGTCGTTTCATAAGCTGGGCTTTGATGAGTTTGAGATTGTGAAATTGATGAGTGAAGACAATGTGATAGGGAGTAGATCATCTGGGAAGGTTTACAAGGTTGTTCTAAGCAGTGGTGCTGCTGTGGCCGTCAAGAAATTATGGAGAGAAACCAAGAATGGAATCAGGATTGTTGGTTCTGAAATAGATGAATTTGATGTTGAAGTTGAAACACTAGGAAAAATAAGGCACAAAAATATAGTAAGGTTGTGGAGTTGCTACAACAATGGTGACAACAGGCTCTTGGTTTATGAATATATGCCGAATGGGAACTTGGCTGATATGTTGAAGAGGATGTAA 1263 0.4204 MTSVKVLHLAYNSFAPSQLPSQLVQLANLKELWLSGCNLIGPIPNSIGNLTCLENLDLSKNKLTGEIPESFSGLNSITTVSKIINVSFNRFSGELPAGLCPWGKLEELLMLFNSFSWKISESLGNCMSLRRVRIGNNNFSGKVPDALWGLPHLHLLELNSDSLSGSVSNLISLAYNLSDLRISDNQFSGLIPDGIGSLNNLLEFHGGNNKLSGRIPDSMAKLIQLGTLDLSYNEMSSEIETLSFVLKDLGNVIAQGGESTGGMHGFSAWIFRSIFALARILFILGVAVFYVRYRNLRKKKRSLNVSKWRSFHKLGFDEFEIVKLMSEDNVIGSRSSGKVYKVVLSSGAAVAVKKLWRETKNGIRIVGSEIDEFDVEVETLGKIRHKNIVRLWSCYNNGDNRLLVYEYMPNGNLADMLKRM* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1358 420 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 267 418 - -
Ahy3g1358 420 SUPERFAMILY Protein kinase-like (PK-like) 325 418 IPR011009 -
Ahy3g1358 420 PRINTS Leucine-rich repeat signature 222 235 - -
Ahy3g1358 420 PRINTS Leucine-rich repeat signature 53 66 - -
Ahy3g1358 420 Gene3D Phosphorylase Kinase; domain 1 307 407 - -
Ahy3g1358 420 Gene3D Ribonuclease Inhibitor 1 255 IPR032675 -
Ahy3g1358 420 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 241 - -
Ahy3g1358 420 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 80 - -
Ahy3g1358 420 Pfam Protein kinase domain 327 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1358 420 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 82 241 - -
Ahy3g1358 420 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 2 80 - -
Ahy3g1358 420 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 267 418 - -
Ahy3g1358 420 ProSiteProfiles Protein kinase domain profile. 325 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1358 420 Pfam Leucine Rich Repeat 28 50 IPR001611 GO:0005515
Ahy3g1358 420 Pfam Leucine Rich Repeat 53 74 IPR001611 GO:0005515
Ahy3g1358 420 SUPERFAMILY L domain-like 2 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1358 Ahy-Chr3 22255313 22257181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1358 1 417 Receptor kinase-like Gene Family AT4G28490 36.594 6.20e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy3g1358 Pkinase 4.00E-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1358 - - ahf:114927454 823.542