Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1355 ATGGAGGGTGGTGGTTCAGAAGAAGAGAAGAGGAAGGAGAAGCCAGCGGAGGTTGAGAACAAGATCAAGCGCAGAATGAAGACTGCTTTTCAGTTGGAAGTTCTGGAGAAAACTTATGTTGGAGAGGCTTACCCTTCAGAAGCAGTGCGAGCTGAGTTATCTGCGAAGCTGGGTCTGTCTGATCGTCAACTGCAAATGTGGTTTTGTCACCGGAGGCTGAAGGATAGGAAATCAGCACCAACAGCGAAGAAGCCCCGAAATGATCACCCGCCTGTGGCACGGGATTCAGTGCCCGTAGGAGAGGGTCTTGAGCAAATGGCAGTGGCTGATGCCATGCATGATTGTGGTTTAGCTTCTGGGTTGAAGCCATTTGGATATTCGGATCCAAGGCAAGTTGTTCCAAATCCTTCGATTTCCTTTCCTAGAACAGGAGCTGGATTGCCAACAATGGAGAACAATAGTTACTATGAACCACATCAGGCCATCGAGGTGCTGCGAGCAATTACGTTTGTGGAGAGACAGTTGGGTCAGCCATTAAGAGAGGATGGACCAATTCTGGGAATGGAATTTGATTCCTTGCCCCCAGGGGCATTTGGTGCCCCAATAGAGGAAGTGACATTGGGACAGCATAGGCATTCTGGAAGCCCTTTCGAGGCAAAAATTTATGATCAACGAAACAAGGGCATTCCAAGGACTCTCCACGAGTATCAGTTTATTCCAGAGCAGCTAACTGTTAGAAATGAGACATTTGACAGAGTTGCCCCCACTATCCATTACAGTTCTCCTGATTGCATTTCACATTCCAGGACTTCACTACCTAGCCAGAAATCTTTGCTTGGTGGGAATGAATCTACACCATATGGATATGGAGTTCAAGATCAGATGCCTGCTTTGAATCATTTGTCTCAGCATGTCAGGCAGAATCATGTTTTGCCTTCTGCTTCTGGACAGATTGAGGGTATTCCACGAAAGAACACATTTGTTGATGTAACAGTTGTTACTCATAGTGGGGTTCACCCAATAACTCTGACTGACACTGCACTAGTGCCATCTGACAACACGGTTATCCATGAGGAGGAACCTTCAAGGTTTCAGAGGAAGCGAATGAATGAAGAAGCTAGAATACGTCGTGAACTTGAAGCTCATGAGAAAAGAGTTAGAAAAGAGATTGGAAAACAGGATATTCTAAGGCGAAAGAGGGAAGAGCAAATAAAGAAAGAGATGGAGAGGAATAACCGTGAAAGGCGGAAAGAAGAAGAAAGGTTGTTACGTGAAAGACAGCGAGAGGAGGAGAGGTACCAAAGAGAACAGAGGCGTGATCTGGAGCGTAGGGAGAAGCTTTTACAGAAAGAATCAATGAGAGCTGAGAAACTGAAACAGAAGGAAGAACTACGCAGGGAGAAAGAGGCAGCAAGGATCAAAGCTGCTTATGAGAGAGCTCTTGCCCGCAGAATGACCAGAGAATCAATGGGACTTATTGAAGATGAACGTCTGGAACTCATGGAACTAGCTACATTGAAGAAGAGACTTCCTTCGATACTGGCTCTTGATTATGAAACTATGCAAAATCTCGAGTTATATAGAGATGGGCAAACACCATTCCCACCCAAGTCTGTGCAGTTGAAAAAACCATTTTCAATCCAACCTTGGTCAGACTCTGAGGAGAAAACAGGAAATCTTCTCATGGTTTGGAGGTTTTTGAATACTTTTGCTGATGTTCTTGGAATATGGTCGTTTACCTTGGATGAACTTATTCAAGCTTTCCATGACTATGATCCAAGGTTGTTAGGTGAAATTCATATTGCTCTTTTGAGATCTATTATGAAAGATATTGAAGATGTTGCAAGAACTCCCTCCACTGGATCAGGAGGTAACCAAAACAATGTTGCCAATTATGGTGGGGGGCATCCTCAAGTAGTTGAAGGGGGTCATGATTGTAAAGACATAATCTCTCATCTGCGCAGTGGAGCTGCAGTAAAAAATGCAGTTGCTATCATGCAAGAGAAGGGATTATCTAAGCCAAGTAGATCAAGACATCACTTGACTCCTGGAACTGTTAAATTTGCTGCATTTCACGTCCTTTCTGTTGAAGGGAGCAATGGCCTCAATATATTGGAAGTTGCAGAGAAAATTCAGAAATCTGGGCTCCGTGATCTTACAACAAGCAAAACTCCAGAGGCTTCTATATCTGCTGCATTGTCTAGAGACACAAAGCTATTTGAAAGGATCGCTCCTTTGACGTATTGTGTACGCCCTGCATATCGAAAGGATCTGTCTGATGCTGAAGCAATTTTTTCAGCTGCCAGGGAAAGAATCAGGGTATTCAAAAGTGGATATATGGATGCTGGTGAAGCAGAAGAGGGGGGAAGAGAAGATGATTCTGAAAATGATGTAGCAGAAGATATTGAAACCGATGATTTAGGAGCTGAAACTAATATAAAAAATGGGGGTTTCAGTTCTGTAGAATTTAATTCAAAAACCGTAATGAGAATTAGAAAGGACACTGGTAAGGTTTCTCAAACACTTGGTTGCTATGACCATGAGAAACTGGATGAGGATATACTGTCAATTGTTTCTGAAGGCATTGATATGCACAAAGGGATTAGTGCCTCTTGTGATATTGCTGTTTGCAGCAATGGTGTGTCTAATCCTAATCTTGAAGGTATGGATATTGATGAAAGCATTCCAGATGAGTCGTGGGTACAGGGGTTAATGGAAGGAGAGTACTCTGACCTCAGTGTTGAGGAGCGTCTTAATGCTCTCGTTGCTTTGGTTAATGTGGCAATTGAAGGGAACTTAATTCGTGTTACACTTGAGGATCGTCTAGAAGCTGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAAGCACAGCTGGGTAAACGTCGTATCAAAGAGGACTACTTTGTTAAGATGCATCCTGTATCTAATTTCAGCAACAAGAGTGAATCAAATAGTGCATTTCCATCACTTGAGGGCAAACAGAAGCCATTCCTTTCTGTTGATAACAAGAACGACGAGGCTTTATTAACCCCTCTTGGCCGGTGCAACCAGATCAACGAACTACTGGAAAATCCAAATCATATTGAGAGTTCCTCATTTGAAGTTAGCCACCAGCTCCATCGAAGTTCTGCTAACCAAGATAATTATTCTTTTCAACAATTTGGATTTGCTCCTGAAAAATCAAGGTCAAATATAAAATCTTACATTGGTTACTTGGCAGAACAAACCTACATGTATAGGACATTGCCTCTTGGCTTGGATCGCAGACATAACCGATACTGGCAGTTCATTACATCTGCTTCTCCAAATGATCCTGGTTGTGGCAGGATTTTTGTGGAGTTGCATGATGGTTGTTGGAAATTGATTGATTCTGAAAAGGGATTTGATTCCCTATTGGGTTCGTTGGATGTACGTGGGATCAGGGAGTCACACTTGCATATGATGTTGCAAAGTATCGAGATGGCGTTCAAGGAATCTATTAGAAGGAATGTCCATAATGGTGATGCAAGAATGGAGAATGGGGACACTGTCAAGAGGCTCAAGACAGAAGCTTTTGAAGTGGATACGAACAATTATTGTAGTGATATTCACCATCCTACATCTGTGTGCATCGATAATTCAGATGCTTCAAAGGTCTCGACATCTTTTGCAGTTCAGCTTGGAAGAAATGAAGCTGAAAACAGGGATGCTCTTCTGAGATATCAGGACTTTGAGAAATGGATGCTAAATGAATGCCTAAATTCGTCAATATTATGTGCCTTGAAGTTTGGGAAGAGGAGGCGTAGCAAACTGTTGACTGTGTGTGATTCATGTCATGATGTTTATTTCTTTGATAGAATCAAATGCCCTTCCTGCAATAGAACTCTCAATGCTCACGGCAAGGCAAAGATTGACACTGATTATTTTCATGTTTCATCTTATCTTCCTTTGAGAATGAGATTGCTGAAGGTCTTATTGTCAATTGTTGAGGTTTCTGTTCCCGAAGAAGCTTTTCACGGTATTTGGACCAACAGTTATAGGAAATCATGGTGTACAAAACTGGATGCTTGCTCATCAACTGAAGACCTCCTGGAGATATTAACTGTATTAGAAAGCGCTATAAAGAGGGAGTATTTGGATTCAAACTATGAAACTACCTCTGAGCTGCTGGGTTCGTTTAGTTCTTCTGGATGTCCTCCAACTAATGATTTTGTAGGTGCTGAAAGGATACTTCCATGGGTGCCGTGCACAACAGCTGCGGTGGCTCTGAGACTCATGGAACTCGATGCATGCACCTCTTACACCTTTCAGCAGAAGATGGAGTCTGAAAAGGATAAAAGAATTGGAATTGTTATGAAGCTTCCGACAAAATATGCTTCTGCCAAATCATCCTGCCGTGATAGTGCAATTGAAGAAAGAGGACAAACGTCCCAACAGGGACAAAGATCCCAGCAGGGACAAAGCATGCATAAGGTTAAGCATACTGTTGAAAACATGGTTGGTCTTGGTGCTGGCCTTGCAAGTTACAGCAGAGGACAAAGGTCCCGACAGGGCTGGAGCCATTCTTGTGTGAGTGGGAGATCACAAGGACGGATTCTTAGTTCAAGACATGATTCTAGAAAGAGAAGCACGACCTCTAGCAGCATGAAAATAGGAAATTTACTTGGATGGAAAGGGAGACCATGTAGGCATGCAGAACAAAATGTACGTGGTCGTCGGAGTGTTCGAAGTAGGCAGAAACCGGCTGTCAAGGTCTGTGTCACCGGTGTTGAGAAGGACACTCCAGATGATATCACAGGGTATACAGCTGGTATCTTTATCAATGAAAAGATGAATGGAAGTGAAGTGGAAGCTGCTGCTAGAAGTGTTAGCAGCTCAGAAAAATCGGCCTATGAAAATGATATTTATCAGTCAACAGTTGATGCGTATGAATATCTAATTGATGATAATAATAATGATGGATATGAGGGTGGATTTAGTGGAAAATCTGAGAACTTTGTAGAGGGGAGCAACCGTAATGTGGATGATGATGAAAATGAGGACGTTGATGACAATGATGATGAAGACGGACAAGTTGATGTTGAAGATTATATAAGCCACAAATCAGATACTGACGCCGGAGAAAATGCCGACCAGAACATGGATCCTAATGGAACAGATTCAACTTAA 5148 0.4264 MEGGGSEEEKRKEKPAEVENKIKRRMKTAFQLEVLEKTYVGEAYPSEAVRAELSAKLGLSDRQLQMWFCHRRLKDRKSAPTAKKPRNDHPPVARDSVPVGEGLEQMAVADAMHDCGLASGLKPFGYSDPRQVVPNPSISFPRTGAGLPTMENNSYYEPHQAIEVLRAITFVERQLGQPLREDGPILGMEFDSLPPGAFGAPIEEVTLGQHRHSGSPFEAKIYDQRNKGIPRTLHEYQFIPEQLTVRNETFDRVAPTIHYSSPDCISHSRTSLPSQKSLLGGNESTPYGYGVQDQMPALNHLSQHVRQNHVLPSASGQIEGIPRKNTFVDVTVVTHSGVHPITLTDTALVPSDNTVIHEEEPSRFQRKRMNEEARIRRELEAHEKRVRKEIGKQDILRRKREEQIKKEMERNNRERRKEEERLLRERQREEERYQREQRRDLERREKLLQKESMRAEKLKQKEELRREKEAARIKAAYERALARRMTRESMGLIEDERLELMELATLKKRLPSILALDYETMQNLELYRDGQTPFPPKSVQLKKPFSIQPWSDSEEKTGNLLMVWRFLNTFADVLGIWSFTLDELIQAFHDYDPRLLGEIHIALLRSIMKDIEDVARTPSTGSGGNQNNVANYGGGHPQVVEGGHDCKDIISHLRSGAAVKNAVAIMQEKGLSKPSRSRHHLTPGTVKFAAFHVLSVEGSNGLNILEVAEKIQKSGLRDLTTSKTPEASISAALSRDTKLFERIAPLTYCVRPAYRKDLSDAEAIFSAARERIRVFKSGYMDAGEAEEGGREDDSENDVAEDIETDDLGAETNIKNGGFSSVEFNSKTVMRIRKDTGKVSQTLGCYDHEKLDEDILSIVSEGIDMHKGISASCDIAVCSNGVSNPNLEGMDIDESIPDESWVQGLMEGEYSDLSVEERLNALVALVNVAIEGNLIRVTLEDRLEAANALKKQMWAEAQLGKRRIKEDYFVKMHPVSNFSNKSESNSAFPSLEGKQKPFLSVDNKNDEALLTPLGRCNQINELLENPNHIESSSFEVSHQLHRSSANQDNYSFQQFGFAPEKSRSNIKSYIGYLAEQTYMYRTLPLGLDRRHNRYWQFITSASPNDPGCGRIFVELHDGCWKLIDSEKGFDSLLGSLDVRGIRESHLHMMLQSIEMAFKESIRRNVHNGDARMENGDTVKRLKTEAFEVDTNNYCSDIHHPTSVCIDNSDASKVSTSFAVQLGRNEAENRDALLRYQDFEKWMLNECLNSSILCALKFGKRRRSKLLTVCDSCHDVYFFDRIKCPSCNRTLNAHGKAKIDTDYFHVSSYLPLRMRLLKVLLSIVEVSVPEEAFHGIWTNSYRKSWCTKLDACSSTEDLLEILTVLESAIKREYLDSNYETTSELLGSFSSSGCPPTNDFVGAERILPWVPCTTAAVALRLMELDACTSYTFQQKMESEKDKRIGIVMKLPTKYASAKSSCRDSAIEERGQTSQQGQRSQQGQSMHKVKHTVENMVGLGAGLASYSRGQRSRQGWSHSCVSGRSQGRILSSRHDSRKRSTTSSSMKIGNLLGWKGRPCRHAEQNVRGRRSVRSRQKPAVKVCVTGVEKDTPDDITGYTAGIFINEKMNGSEVEAAARSVSSSEKSAYENDIYQSTVDAYEYLIDDNNNDGYEGGFSGKSENFVEGSNRNVDDDENEDVDDNDDEDGQVDVEDYISHKSDTDAGENADQNMDPNGTDST* 1716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1355 1715 CDD homeodomain 21 78 IPR001356 GO:0003677
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 409 439 - -
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 1463 1484 - -
Ahy3g1355 1715 Pfam DDT domain 556 610 IPR018501 -
Ahy3g1355 1715 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 897 935 IPR028942 -
Ahy3g1355 1715 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 643 1711 - -
Ahy3g1355 1715 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 642 - -
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 1687 1701 - -
Ahy3g1355 1715 Gene3D - 11 91 - -
Ahy3g1355 1715 ProSiteProfiles 'Homeobox' domain profile. 18 78 IPR001356 GO:0003677
Ahy3g1355 1715 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 643 1711 IPR044977 GO:0006357
Ahy3g1355 1715 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 642 IPR044977 GO:0006357
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 1647 1715 - -
Ahy3g1355 1715 Coils Coil 397 474 - -
Ahy3g1355 1715 SMART testlast3 554 613 IPR018501 -
Ahy3g1355 1715 ProSiteProfiles DDT domain profile. 554 613 IPR018501 -
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 75 97 - -
Ahy3g1355 1715 Pfam Homeodomain 23 77 IPR001356 GO:0003677
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 75 91 - -
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 1509 1541 - -
Ahy3g1355 1715 Pfam HB1, ASXL, restriction endonuclease HTH domain 684 751 IPR007759 GO:0006355
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 1667 1686 - -
Ahy3g1355 1715 ProSiteProfiles HARE-type HTH domain profile. 684 753 IPR007759 GO:0006355
Ahy3g1355 1715 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1080 1152 IPR028941 -
Ahy3g1355 1715 SMART HOX_1 20 82 IPR001356 GO:0003677
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 1509 1525 - -
Ahy3g1355 1715 MobiDBLite consensus disorder prediction 1458 1484 - -
Ahy3g1355 1715 SUPERFAMILY Homeodomain-like 19 77 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1355 Ahy-Chr3 22225115 22238433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1355 1 1439 Homeobox Transcription Factor Family AT5G44180 45.969 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy3g1355 WSD 4.30E-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1355 - - gmx:100797480 1896.32