Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1332 ATGGGTTTGCTTTCATCTTCTTATTCTTCTTCTTTCACCACTTTTGCTCTATTCCTCTTTCTTGTACAATTATCTTGCTTCTTCAATAACCTTAATGCAAAGCATAGTGTGGCCAATAGTCACAACAGGCGTGGCCACCATCACCACCACAACACCCAGAATCCCCCATTGAATCCGAGGCTTGATCGCGCCTTTCTTGCGCTGCAAGCATGGAAGAGTGTCATCTATTCCGACCCAAAAAACTTCACTGCCAATTGGGTAGGTCCTAGAGTTTGCAATTACACAGGTGTGTATTGTGCTCCATCACAAGATGACCCTAAAGTGACAGTTGTAGCAGGCATTGACCTTAACCACGGCGACATAGCCGGCTTCCTACCGGCGGAATTAGGCCTGCTTTCAGACCTTGCTCTGCTCCATCTCAACAGCAACCGCTTCTGCGGCATCCTCCCAAGAACACTAAGCAACCTCAGCCTCCTTCACGAGCTTGATCTTAGCAACAACAGATTTGTTGGACCTTTTCCAACGGTTGTTCTTTCCCTTCCTTCCCTCAGATACCTTGACATTCGGTTCAACGAATTCGAAGGCTCATTGCCTGTTGATCTCTTTAACAAAACCTTTGATGCAATATTTCTCAATAACAACCGTCTTAGCAGTTCCATCCCACGAAGCTTCGGCCGAATCTCGGCCTCTGTCCTGGTTTTTGCCAACAACAGATTCGGAGGCTGTCTTCCAGAAAGCATAGTGAACTTAGCTGAAACACTGGAAGAGCTTGTCATGATCAACACCAGTTTACAAGGTTGTTTGCCACAGCAAGTTGGATTTCTCTACAAATTAAGAGTATTTGATGTTAGTTTCAACAAAATTGTTGGCCCAATTCCTTATAGCCTTGCAGGGCTTTCTCATTTGGAGCAGCTCAATTTGGCACACAATATGATGACCGGCATAGTCCCTATGGGAGTTTGTGAGCTTCCCAACTTGGCGAATTTCACATTTTCTTATAACTTCTTCTGCGAGGAAGAGGGAATTTGCCGGAACTTGACATCTAAAAGAACTGTCTTTGATGATCGCCGCAACTGTTTGCCGGAGAAGCCGCTACAGAGGAGCAAGAAGGAGTGCAATGCTGTAAATCAGAACCCTGTTGATTGCATAAAACTTTGTTGTACCACAGAAGGTGGTTTTGGAAACAATGCCACAAGTTCTAGCTCAATGCCAACAATGCCTATTTCTGCACCTCCTTTTATTGCACCAAGCCACCCATGA 1260 0.4524 MGLLSSSYSSSFTTFALFLFLVQLSCFFNNLNAKHSVANSHNRRGHHHHHNTQNPPLNPRLDRAFLALQAWKSVIYSDPKNFTANWVGPRVCNYTGVYCAPSQDDPKVTVVAGIDLNHGDIAGFLPAELGLLSDLALLHLNSNRFCGILPRTLSNLSLLHELDLSNNRFVGPFPTVVLSLPSLRYLDIRFNEFEGSLPVDLFNKTFDAIFLNNNRLSSSIPRSFGRISASVLVFANNRFGGCLPESIVNLAETLEELVMINTSLQGCLPQQVGFLYKLRVFDVSFNKIVGPIPYSLAGLSHLEQLNLAHNMMTGIVPMGVCELPNLANFTFSYNFFCEEEGICRNLTSKRTVFDDRRNCLPEKPLQRSKKECNAVNQNPVDCIKLCCTTEGGFGNNATSSSSMPTMPISAPPFIAPSHP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1332 419 PANTHER EXTENSIN-LIKE PROTEIN 7 418 - -
Ahy3g1332 419 Pfam Leucine rich repeat 135 192 IPR001611 GO:0005515
Ahy3g1332 419 MobiDBLite consensus disorder prediction 398 419 - -
Ahy3g1332 419 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 418 - -
Ahy3g1332 419 Pfam Leucine rich repeat N-terminal domain 65 99 IPR013210 -
Ahy3g1332 419 Gene3D Ribonuclease Inhibitor 231 375 IPR032675 -
Ahy3g1332 419 Gene3D Ribonuclease Inhibitor 64 230 IPR032675 -
Ahy3g1332 419 SUPERFAMILY L domain-like 65 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1332 Ahy-Chr3 21823430 21825113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1332 58 411 Trihelix Transcription Factor Family AT2G15880 52.542 3.82e-137 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1332 - - adu:107478209 784.637