Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1324 ATGGATGAATTGGAAAGTAGAAGTGAAGCTTCTCCATCTTCAACAAACAAGGAGAAGATTGAGAGAAGGTTCATTGAGAGAAACAGAAGGAAGCACATGAAGATGCTCTACTCCACACTCAACTCTCTTCTCCCTAACGACCCCAACCCCACTAGGCCCAAGGAAGCACTGCTATTGCTTGATCAAGTGGACAAGGCCTTAAATTACATCAAGAGCTTAGAGGAGAAGGTAAAAATGTCTAAGGAGAAGAAAAATAGCTTACTATTGAGAATGGGAAGAAAGAGGACACGTGGCGCTTGCGACGATGGTAATCGCCCCAAACCGCCGCAACTAGAGGTTCATGAAATGGGTTCATGTCTTCAAATTGTAATGACATGTGGATTAGATTCCCAGTTCATATTCTATAAAATCATTCATATTCTGAATGAAGAAAACATCGATGTTAAGAGTGCCAATTCTTCGCTCATCGGAAATTCCATGCACCATGTTGTTCATGCAGAGATTCCACAATCTTTGCTTCAATTGGGTGCGACTAAAGTAAGGGAGAGTTTGAAAAGGTTTGTGCAGGAACCAATTAGTAAAAATGAATTACAATCTGATCATGAGTTGTTAGATTTTGAGATCGATACTGCTGAATTAGCGGAGCTTCTAGATTTCTTAGCATAA 666 0.4039 MDELESRSEASPSSTNKEKIERRFIERNRRKHMKMLYSTLNSLLPNDPNPTRPKEALLLLDQVDKALNYIKSLEEKVKMSKEKKNSLLLRMGRKRTRGACDDGNRPKPPQLEVHEMGSCLQIVMTCGLDSQFIFYKIIHILNEENIDVKSANSSLIGNSMHHVVHAEIPQSLLQLGATKVRESLKRFVQEPISKNELQSDHELLDFEIDTAELAELLDFLA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1324 221 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 73 IPR011598 GO:0046983
Ahy3g1324 221 SMART finulus 23 79 IPR011598 GO:0046983
Ahy3g1324 221 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 19 94 IPR036638 GO:0046983
Ahy3g1324 221 Pfam Helix-loop-helix DNA-binding domain 22 74 IPR011598 GO:0046983
Ahy3g1324 221 MobiDBLite consensus disorder prediction 1 20 - -
Ahy3g1324 221 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 13 195 IPR015660 GO:0003700|GO:0006357
Ahy3g1324 221 Coils Coil 63 90 - -
Ahy3g1324 221 Gene3D - 9 98 IPR036638 GO:0046983
Ahy3g1324 221 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 13 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1324 Ahy-Chr3 21673225 21675901 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1324 9 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 32.461 4.47e-21 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy3g1324 HLH 7.90E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1324 - - gmx:100817883 214.542