Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1322 ATGGGAAGAAACAGGACACGTGGCGCTGGCGGCCTTCGTGATCTCTCGAAACCGCCACAGCTAATGGTTCATGAAATGGGTTCATATCTTCAAATTGTAATGACATGTGGATTAGATTCCCAGTTCATATTCTCTGAAATCATTCGTATTCTGAATGAAGAGAACATTGATGTCAAGAGTGTCAAATCCTCACTCGTCGAAAATTCCATGCACCATGTTGTTCATGCAGAGATTTCACAATTTTTGCTTCAGTTGGGTGCAACTAAAGTAAGTGAGAGATTGAAAAGGTTTGTGAATGAACCAACCAGTGAAATTGAATTACAATCTGATCATCAGTTATTGGATTTTGAGATTGATACTGATGAATTAGCGGAGCTTCTAGATTTTTTAGAAGAGAAATGA 402 0.3856 MGRNRTRGAGGLRDLSKPPQLMVHEMGSYLQIVMTCGLDSQFIFSEIIRILNEENIDVKSVKSSLVENSMHHVVHAEISQFLLQLGATKVSERLKRFVNEPTSEIELQSDHQLLDFEIDTDELAELLDFLEEK* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1322 133 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 18 105 - -
Ahy3g1322 133 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 18 105 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1322 Ahy-Chr3 21631661 21632549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1322 17 99 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 31.765 5.92e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1322 - - adu:107478214 232.646