LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy3g1310	ATGATCTCTTTTGCAACAATAACAACAATAATGTCTTCCCTTCTCATATATCTCTTCCTTCTGAGAATAACCTTAGTTTCTTCGTCAACAGAATTTGTCTACAACACCAACTTCAACTCCACCAACATAAATCTCTATGCAAACGCCACTATTGATGATCACTCTCACTCTTCAATTCTCACCCTTACCAACCATGCCTCTTTCTCTATTGGCCGTGCTTTCTACCCTTCCAAGATCCCAACAAAATCTTCCTTTTCTTCCAACCCTTTACCGTTCTCAACCTCCTTCATCTTCTCTATTGCACCATTCAAGCACCTTCTCCCTGGCCATGGTTTTGTGTTCTTGTTCTCACCTTTTGAAGGAGCAAACGGGGTTAGCTCAGCTCAGCACCTTGGCCTCTTCAACTTGACCAACAATGGTAACCCCAAAAACCATGTTTTTGGGATTGAGTTTGATGTGTTCAAGAACCAAGAATTCAATGACATCAATGATAACCATGTGGGTTTGGATGTGAATTCTCTTACTTCTTTGGCCTCACACGATGCTGGATTTTGGGTCAGTGGAAAACATGATGAAAAGTTTAAGGAATTGAAGCTTAACAATGGGCAACTTGTTGAGAGTCACAAGATTTTGGCATGGAGCTTTAGCAACTCAAATTTTTCAATCGGCGATGCTTTGGTGACTACGAATTTGCCTTCATTTGTGCTTCCAAAAGAACCAGTTTTGAAGTCAAGAGGTTTTGTTTCAGGTATCAGTTTTGGGATTTTTATCTTTGTTATTGGTAGTGCAGCTATGGTGTTTGTTGTTTTGCTCAAAAGAAAAAGAAGCAAAAGAATGGAGGAAGAGGGAGATATTGAAGACTGGGAATTAGAGTATTGGCCACACCGTATTAGTTATGAAGACATTTATGCTGCAACTAAAGGATTTTCAGAACAGAATATAATTGGGTTTGGAGGGAATGGAAAAGTTTATAAAGGGATTCTACAAGGAGTAGAGGTAGCAGTGAAAAGAATCCCTTATGACAGTGAATATGGTATGAGGGAGTTTCTATCTGAGATTTCAAGCTTAGGAAGATTGAAGCATAGGAATGTGGTTCCATTGAGGGGTTGGTGCAAGAAAGAGAGAGGAAGCTTGATCCTAATTTATGATTATATGGAGAATGGAAGTTTGGACAAGATAATATTTGATTCTGATGAGAACTCAATTTTCCATTGGAAAAACAGAATCAAGGTGCTGAAGGATGTGGCTATGGGGATATTGTATTTGCATGAGAGTTGGGAAGTTAAGGTGTTGCATAGGGACATAAAAGCAAGCAATGTGTTACTTGACAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTCGCCCGGATGCATCATCATGAGCAGATACCTAACACCTCTCGAGTGATCGGAACGGTTGGCTACATGGCACCGGAACTGCTAAGAACCGGGAGAGCCTCGACGCAAACTGATGTGTTCAGCTTCGGCGTGTTGGTTCTAGAGGTTGTGTGTGGGAGAAGGCCTATAGAAGAGAATAAGCCAGCATTGGTTGGTTGGGTGTGGAGGCTAATGGAGAGAGGACAGTTGTGTTGTGCTCTTGATGAAAGATTGAAAATGAGGGGTGATGAAGATTATAGCATTGATGAAGTTGAGAGAGTTCTTCATCTTGGTTTGTTGTGCACACATTATGATCCTCAAGTTAGGCCAAGTATGAGGCAAGTTGTGAAGGTTTTGGAGGGTGAGAGTTTGGAAATAAGCTTAGTTGATAAAATAAATTCCGCTGCTGATGGATATAGTGGGGTTCACCCCACCATTGAAGATATATCTCAATGTTCTTTCACAACTCAATGTGAGGGCAGATGA	1866	0.4105	MISFATITTIMSSLLIYLFLLRITLVSSSTEFVYNTNFNSTNINLYANATIDDHSHSSILTLTNHASFSIGRAFYPSKIPTKSSFSSNPLPFSTSFIFSIAPFKHLLPGHGFVFLFSPFEGANGVSSAQHLGLFNLTNNGNPKNHVFGIEFDVFKNQEFNDINDNHVGLDVNSLTSLASHDAGFWVSGKHDEKFKELKLNNGQLVESHKILAWSFSNSNFSIGDALVTTNLPSFVLPKEPVLKSRGFVSGISFGIFIFVIGSAAMVFVVLLKRKRSKRMEEEGDIEDWELEYWPHRISYEDIYAATKGFSEQNIIGFGGNGKVYKGILQGVEVAVKRIPYDSEYGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILIYDYMENGSLDKIIFDSDENSIFHWKNRIKVLKDVAMGILYLHESWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHHHEQIPNTSRVIGTVGYMAPELLRTGRASTQTDVFSFGVLVLEVVCGRRPIEENKPALVGWVWRLMERGQLCCALDERLKMRGDEDYSIDEVERVLHLGLLCTHYDPQVRPSMRQVVKVLEGESLEISLVDKINSAADGYSGVHPTIEDISQCSFTTQCEGR*	622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy3g1310	621	CDD	lectin_legume_LecRK_Arcelin_ConA	30	218	IPR001220	GO:0030246
	Ahy3g1310	621	Coils	Coil	271	291	-	-
	Ahy3g1310	621	Gene3D	-	27	204	-	-
	Ahy3g1310	621	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	430	442	IPR008271	GO:0004672\|GO:0006468
	Ahy3g1310	621	ProSiteProfiles	Protein kinase domain profile.	309	606	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy3g1310	621	Pfam	Legume lectin domain	30	203	IPR001220	GO:0030246
	Ahy3g1310	621	PANTHER	-	15	203	-	-
	Ahy3g1310	621	PANTHER	-	202	584	-	-
	Ahy3g1310	621	Pfam	Protein kinase domain	310	577	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy3g1310	621	Gene3D	Phosphorylase Kinase; domain 1	269	384	-	-
	Ahy3g1310	621	SUPERFAMILY	Protein kinase-like (PK-like)	287	580	IPR011009	-
	Ahy3g1310	621	Gene3D	Transferase(Phosphotransferase) domain 1	385	594	-	-
	Ahy3g1310	621	CDD	STKc_IRAK	315	581	-	-
	Ahy3g1310	621	ProSitePatterns	Protein kinases ATP-binding region signature.	315	336	IPR017441	GO:0005524
	Ahy3g1310	621	SMART	serkin_6	309	579	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy3g1310	621	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1	15	203	-	-
	Ahy3g1310	621	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1	202	584	-	-
	Ahy3g1310	621	SUPERFAMILY	Concanavalin A-like lectins/glucanases	30	218	IPR013320	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy3g1310	Ahy-Chr3	21337054	21342357	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy3g1310	28	533	Receptor kinase-like Gene Family	AT4G04960	56.560	0.0	594

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Ahy3g1310		Pkinase	5.20E-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy3g1310	-		-	adu:107478122	1223.38