Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1265 ATGATGCAGCAAGGTGTAAACATGGAAGACAAGGAGGAGATGGAATCATTGCTTGGTCAAGCTGAAATCTGGAAGTTCATGACCAGCTTCACAGACTCCATGGCGCTAAAATGCGCCGTAGAGCTCGGCATCGCCGACATAATCGAGCGGCACGGCGAGTCACTGCCGTTGTGGAAGATCGGCGAAGAAATTGAAGACGCGGCTTCGCCTGAGATCTCCATGCTCGAAAGAATAATGAGGGTTCTTGTAAGAAGAAAGATCTTCAGTGCTCAGCACTCGGAAAACGGAGACACGGTGTACGGAGCCACACGCGCCTCCAAGTGGATCCTACGCGACGCAAAGATGACATTGGCGCCGATGTTGCTGCTTGAGAATCATCCCATTCACTTGAACCCTGCTCACTACATTAGTCAGTGTATCAGGGAAGGAATGCAAAATGGAACTGCGTTTTTCAAGTGCCATGGCCATGAACAATTTGTTATGACAGGTTTGGACCCTGAATATAACAGGTTGTTCAATGAGGGTATGGTTTGCACTGCAAGGGTTGTGTCAAAGGCTGTGATATCAGGCTACAAAGATGGGTTCAAAGAGATTAAGTCTTTGGTTGATGTTGGAGGTGGAATTGGAGGGTCACTCTCTGAGATTGTGAAGGCATTCCCACACATCAAAGGTATTAACTTTGATTTGCCTCATGTTGTTGCAACGGCACCCATGTATGATGGTGTCACCCATGTTGGTGGAGACATGTTTGCTTCCATTCCTCAAGCAGATGCTATTTACATGAAGTGGATTTTACATGATTGGAGCGACGAGCACTGCATAAAGATTTTGAAGAACTGCAAGAAGGCAATAGGAGAGAGTGGGAAGGTGATAATTGTGGATCATGTTCTTAAACCAGAAGGAAATGGTGTGTTTGATGACACTGGGTTTGCCTTCGACATGATGCTTCTTGCACACAACAGTGGCGGCAAAGAAAGGACCCAAGAAAATTGGAACTGCCTCTTTAAGGAAACAGGCTTCCCTCGCTACAACATCATCAACATCAATGCTCTTCCATCAATCATTGAGGCATTCCCAGTCTGA 1083 0.4645 MMQQGVNMEDKEEMESLLGQAEIWKFMTSFTDSMALKCAVELGIADIIERHGESLPLWKIGEEIEDAASPEISMLERIMRVLVRRKIFSAQHSENGDTVYGATRASKWILRDAKMTLAPMLLLENHPIHLNPAHYISQCIREGMQNGTAFFKCHGHEQFVMTGLDPEYNRLFNEGMVCTARVVSKAVISGYKDGFKEIKSLVDVGGGIGGSLSEIVKAFPHIKGINFDLPHVVATAPMYDGVTHVGGDMFASIPQADAIYMKWILHDWSDEHCIKILKNCKKAIGESGKVIIVDHVLKPEGNGVFDDTGFAFDMMLLAHNSGGKERTQENWNCLFKETGFPRYNIININALPSIIEAFPV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1265 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 359 IPR016461 GO:0008168
Ahy3g1265 360 PANTHER O-METHYLTRANSFERASE 11 359 IPR016461 GO:0008168
Ahy3g1265 360 Pfam O-methyltransferase domain 135 340 IPR001077 GO:0008171
Ahy3g1265 360 Pfam Dimerisation domain 34 83 IPR012967 GO:0046983
Ahy3g1265 360 CDD AdoMet_MTases 201 297 - -
Ahy3g1265 360 Gene3D Vaccinia Virus protein VP39 111 360 IPR029063 -
Ahy3g1265 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Ahy3g1265 360 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 11 359 - -
Ahy3g1265 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Ahy3g1265 360 SUPERFAMILY "Winged helix" DNA-binding domain 18 112 IPR036390 -
Ahy3g1265 360 Gene3D - 5 109 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1265 Ahy-Chr3 20157011 20161319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1265 34 346 Monolignol Biosynthesis Gene Families AT5G54160 37.931 8.16e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1265 K22588 - gmx:100800801 588.186