Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1238 ATGAAGATGGGTTCCTTCTTCATGAGGACCTCCAATGCTCTCAAAGGCTACTCTTCATCCTCCAAGCTGCTTCTTCTCTGCACTCTCAGCATCAGTGGTGGAGGTGTAGTGGCATACTCAGAATCACGATCAGAAACCGAACATCCTATTATTGATGCTCATGTAGCCCCCAAAAAGAAAGTAGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTGGATGCCTCACGATACGATGTTCAGGTTGTTTCGCCTCGGAACTACTTTGCGTTCACTCCCTTGTTACCCAGTGTCACTTGTGGAACAGTTGAAGCTCGAAGCATCGTAGAGCCAGTTCGGACCTTAATAAAAAAGAATAAAGGTGAAATAAAATATTGGGAGGCAGAGTGTGTCAAGATTGATGCTGCAAACAGAAAGGTCTTTTGTAAAGACAATATCAACAACTTAGTGGGAAGGGGCGAATTTTCGTTGGACTACGACTTCTTGGTTTTAGCAGTAGGATCACAAGTAAATACTTTTAACACCCCTGGAGTGAAAGAGAACTGCCACTTTCTGAAGGATATCGAGGATGCTAAGAGGATCAGGCTGTCTATCACAGATTGCTTTGAGAAGGCTGTTCTTCCTAGTCTATCTGAAGAAGATCGAAGGTCGAATCTTCATTTTGTAGTTGTTGGTGGGGGTCCAACTGGAGTAGAATTTGCTGCAGAGCTCCATGATTATGTCCAAGAAGATTTGACGAACTTGTATCCAGCCGTTAAGGATTCAGTGAAGATAACATTGATTCAATCAGGAGATCACATCCTGAATACGTTTGATAAAAGAATAAGTACATTTGCTGAGCAGAAGTTTTCAAGAGACGGTATAGAGGTTCAAACAGGATGTCGTGTCATCAGTGTTAGCGACAAGGAAATTACAATGAAGGTGAAATCAACAGGAGAGATTTGCTCTGTGCCGCACGGATTGATTGTCTGGTCCACTGGCATTTCAACTATTCCAGTTATAAGGGACTTTATGGAACAAGTTGGTCAGGGTAAAAGACGTGTACTAGCAATCGACGAATGGTTGCGAGTAAAAGGATGTGAAAATGTGTATGCTGTTGGTGATTGTTGTACAATAGATCAACGAAAGATCATGGACGATATCTCGGCCATATTTGCGGCTGCAGACAAAAATAACTCCGGTACCTTAACCATTGAAGAATTCCAAGATGTGATGGATGACATCTTATTAAGATATCCACAAGTTGAACTTTTTATGAAGAAAAAGCATCTTCTTGATTTCACCTCTCTGTGGTTAGATTCACAAGGGAATGAAAGAAAAGAGATAGACATAGAAGGGTTTAAGCAGGCTCTTTCTCATGCGGATTCACAGATGAAGAGTCTTCCAGCTACTGCACAGGTTGCTGCCCAACAAGGTACCTATCTAGCTAGATGCTTTAATCGCATGGATCAATGTGAAGAGAATCCTGAAGGTCCTCGGCGATTTAGAGGAACCGGACGTCATAAGTTCCTTCCCTTCCGGTATAAGCATTTTGGGCAATTCGCACCGCTGGGCGGCGAGCAAGCAGCCGCAGAGCTTCCCGGGGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTCTGGTATTCTGTATATGCAAGCAAGCAAGTAAGCTGGCGCACAAGGGTATTGGTCATATCTGATTGGACTAGAAGATTCATTTTTGGAAGAGACTCAAGTCGTGTTTAG 1740 0.4351 MKMGSFFMRTSNALKGYSSSSKLLLLCTLSISGGGVVAYSESRSETEHPIIDAHVAPKKKVVVLGTGWAGTSFLKDLDASRYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRTLIKKNKGEIKYWEAECVKIDAANRKVFCKDNINNLVGRGEFSLDYDFLVLAVGSQVNTFNTPGVKENCHFLKDIEDAKRIRLSITDCFEKAVLPSLSEEDRRSNLHFVVVGGGPTGVEFAAELHDYVQEDLTNLYPAVKDSVKITLIQSGDHILNTFDKRISTFAEQKFSRDGIEVQTGCRVISVSDKEITMKVKSTGEICSVPHGLIVWSTGISTIPVIRDFMEQVGQGKRRVLAIDEWLRVKGCENVYAVGDCCTIDQRKIMDDISAIFAAADKNNSGTLTIEEFQDVMDDILLRYPQVELFMKKKHLLDFTSLWLDSQGNERKEIDIEGFKQALSHADSQMKSLPATAQVAAQQGTYLARCFNRMDQCEENPEGPRRFRGTGRHKFLPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVISDWTRRFIFGRDSSRV* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1238 579 SUPERFAMILY EF-hand 334 459 IPR011992 -
Ahy3g1238 579 ProSitePatterns EF-hand calcium-binding domain. 393 405 IPR018247 -
Ahy3g1238 579 PANTHER NADH DEHYDROGENASE 56 579 IPR045024 GO:0003954|GO:0006116
Ahy3g1238 579 SUPERFAMILY FAD/NAD(P)-binding domain 223 377 IPR036188 -
Ahy3g1238 579 SMART efh_1 384 412 IPR002048 GO:0005509
Ahy3g1238 579 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
Ahy3g1238 579 SUPERFAMILY FAD/NAD(P)-binding domain 58 276 IPR036188 -
Ahy3g1238 579 Gene3D - 430 579 - -
Ahy3g1238 579 Gene3D - 49 398 - -
Ahy3g1238 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 163 181 - -
Ahy3g1238 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 224 242 - -
Ahy3g1238 579 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Ahy3g1238 579 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 56 579 - -
Ahy3g1238 579 Pfam Pyridine nucleotide-disulphide oxidoreductase 59 382 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1238 Ahy-Chr3 19578286 19582707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1238 1 579 Chloroplast and Mitochondria Gene Families AT4G21490 63.014 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1238 K03885 - gmx:100793566 972.23