Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1229 ATGGAGTTTGACCTTGAAAATCCTCTACACAACTCTCATGCTCTTCCTCAATGGGATGCTGTTGCTTCACTATTCCACATTGAATCTCAACACACTCCATCTCACACTTACTTTCACTCTCTCAAAGCTTCAAACTTTAACATCTCTGTTAGAAGGGAACTCATTTCTCTAATCTCCAAGTTTTCTTGCAGTTTGGATCCACTTGTCTCTTACCTTTCTATCAACTATCTAGACCGGTTCTTGTCCAACCATGGGATACCGAAACAAAAGGCATGGGCCCTTAGGCTGCTTGCAATTTCTTGCATTTCTTTAGCATCCAAGATGATAAAGCCAGGGTACTCTGCCATTGATACTCAGGCCCTTCTCATGAATGATGGTGGCATCATTTTTGAGACACAAACAATGCAAAGAATGGAAGGACTCATCTTGGGAGCATTGGAATGGAGAATGCGGTCCATTACCCCTTTCTCCTTCTTAACTTTCTTCATTACTTTAATATGTGTCAAACACCCAATGGAACAGGTTCTCAAGAAAAGAGTGGCTGAAATTATATTCAAGTCACAAGGAGAGATAAAGCTTTTGGAATTCAAGCCATCTATAATTGCCGCATCAGCACTTCTTTGTGCTTCTCATGAACTCTTTCCTTTTCAATACCAAAGCTTCTCAGCAGCAATATCCAATTGTTTATATGTAAATAAAGAAAACATGGTGAAATGCTATAATGTGATACAAGAAGTGGTAGGAATGGAGATGGAAGAAGAGGAGTGTGTGATCAATGAAGTTTCAAGTTCAGGAACACCAGTGAATGTGTTAGACTTGGACCATAAGTTTTCACTGAGCTCAGAAAGTGAGAAAACCAATAATAATGGAGGAATGGCCATAGTAGTAGATGATGATGATGAAGAAGCCTTGCAAGAGAAGAAGGATTTCATCATCAACAAGAGAAGGAAGATGAATAATAATAACAACAATCAAACGGTCCATGTTTCTCGGATTGCACAATGCTGA 1008 0.3938 MEFDLENPLHNSHALPQWDAVASLFHIESQHTPSHTYFHSLKASNFNISVRRELISLISKFSCSLDPLVSYLSINYLDRFLSNHGIPKQKAWALRLLAISCISLASKMIKPGYSAIDTQALLMNDGGIIFETQTMQRMEGLILGALEWRMRSITPFSFLTFFITLICVKHPMEQVLKKRVAEIIFKSQGEIKLLEFKPSIIAASALLCASHELFPFQYQSFSAAISNCLYVNKENMVKCYNVIQEVVGMEMEEEECVINEVSSSGTPVNVLDLDHKFSLSSESEKTNNNGGMAIVVDDDDEEALQEKKDFIINKRRKMNNNNNNQTVHVSRIAQC* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1229 335 SMART Cyclin_C_2 153 270 IPR004367 -
Ahy3g1229 335 Gene3D - 23 241 - -
Ahy3g1229 335 SMART cyclin_7 52 144 IPR013763 -
Ahy3g1229 335 Pfam Cyclin, N-terminal domain 21 150 IPR006671 -
Ahy3g1229 335 PANTHER CYCLIN-D6-1-RELATED 5 282 - -
Ahy3g1229 335 Coils Coil 301 321 - -
Ahy3g1229 335 PANTHER CYCLINS 5 282 IPR039361 -
Ahy3g1229 335 SUPERFAMILY Cyclin-like 17 150 IPR036915 -
Ahy3g1229 335 Pfam Cyclin, C-terminal domain 153 252 IPR004367 -
Ahy3g1229 335 CDD CYCLIN 51 108 IPR013763 -
Ahy3g1229 335 Gene3D - 34 151 - -
Ahy3g1229 335 SUPERFAMILY Cyclin-like 135 246 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1229 Ahy-Chr3 19358903 19361199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1229 1 286 Core Cell Cycle Gene Families AT4G03270 44.884 5.77e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1229 K18812 - gmx:100799951 336.265