Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1226 ATGGTGAGAGCTCCTTTCTATGACAAATATGGAGTGAAGAAAGGTGCATGGAGTAGAGAAGAGGATCAAAGATTAATAGCTTTTGTTCAAAGATATGGTCATTCTAATTGGCGTCAGCTCCCAAAGTTTGCAGGTTTAGCAAGGTGTGGGAAAAGTTGCAGACTTCGCTGGTTGAATTACTTGAGGCCAAATCTAAAACATGGGAACTACACCCAAGAGGAAGAAGAATTAATAATCAAATTACACCAAGAATTAGGAAATAGATGGTCTTTGATTGCTGAAAGACTTCCTGGAAGAACAGACAATGAAATAAAGAACCATTGGCATAGCCACCTCAAGAAGTTATCATCAAAAAACAACAACAATGAGATCAACCCATCATCTGAATCTGAATCTGAATCAAAATCAAACAACCCAATTGATGATGATATTCTTGAAGGAAAACATACCAATCAGCCTAAAGATTCTGTAAGGCCAAGTTATGATTATGTTGATAGTGCTAATAATAATAAATTCCAGCACCGTGTTCTAGAAAGTTCATCATCAACAGAAACTTCGTCATATACTGATGATGAAGTAGGTCACAGCTATTATTCTCTTACTCCCAATAATGTTGAACAATCAACAATAATGAATAACTCTCCAACATCAAGCGAAGATTATTGTGTGGTTCCGTCAGTATCATTTGAAGAATTTGGTGGAGATTTTTGGACTGAGCCATTCATAGTGGCAAATAATGATGCATATGCTAATGATGAGATAATAATAAGTGGTGAAGACGATGTTGGGTTTCTTGTTCCATACTTGTACGAGAGTGCAGATTTTTGTTTTAACTTGTAG 840 0.3619 MVRAPFYDKYGVKKGAWSREEDQRLIAFVQRYGHSNWRQLPKFAGLARCGKSCRLRWLNYLRPNLKHGNYTQEEEELIIKLHQELGNRWSLIAERLPGRTDNEIKNHWHSHLKKLSSKNNNNEINPSSESESESKSNNPIDDDILEGKHTNQPKDSVRPSYDYVDSANNNKFQHRVLESSSSTETSSYTDDEVGHSYYSLTPNNVEQSTIMNNSPTSSEDYCVVPSVSFEEFGGDFWTEPFIVANNDAYANDEIIISGEDDVGFLVPYLYESADFCFNL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1226 279 MobiDBLite consensus disorder prediction 135 155 - -
Ahy3g1226 279 CDD SANT 69 112 IPR001005 -
Ahy3g1226 279 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy3g1226 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy3g1226 279 MobiDBLite consensus disorder prediction 114 195 - -
Ahy3g1226 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy3g1226 279 CDD SANT 16 61 IPR001005 -
Ahy3g1226 279 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy3g1226 279 MobiDBLite consensus disorder prediction 156 195 - -
Ahy3g1226 279 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 249 - -
Ahy3g1226 279 SMART sant 13 63 IPR001005 -
Ahy3g1226 279 SMART sant 66 114 IPR001005 -
Ahy3g1226 279 MobiDBLite consensus disorder prediction 115 134 - -
Ahy3g1226 279 PANTHER MYB-RELATED PROTEIN 308-LIKE 1 249 - -
Ahy3g1226 279 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy3g1226 279 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Ahy3g1226 279 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy3g1226 279 Gene3D - 13 66 - -
Ahy3g1226 279 Gene3D - 69 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1226 Ahy-Chr3 19268479 19270281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1226 1 194 MYB Transcription Factor Family AT2G31180 48.309 9.64e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g1226 Myb_DNA-binding 3.30E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1226 K09422 - gmx:100781032 207.994