Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1218 ATGATTGCGTCTCACTTACATGGAAGATCAGACAACGAGATAAAGAATCGGTGGCACTCCCAACTTAAGAAGCGATTCCAACACACTTCAGCCTCCAATTCAAATAATCATAATGCCTTAATTCAATCAACGGAAGAAGAGATAGTGAATAATAATCATAATAATAATGCCACTACAAATGAATACCCTTCTAATAATCTTCACAACACTTCTCCAGCTTCTTCTCAAAGCGATACATATGACGATTTTTCTCCATTGAGTGACTTTTTCTACACACCTGCGGTGGATCTTGCTGCACCATTTGGTAATAACTCGGTTTTGGCTATTGATAATGATGATCACTATGCTAATTTCCTGGATAATATGGTACATAGTAACATAGTGCCAATTGGTGCAGATTGTGTTTGGACTCAACAGGATTATTCAAGTCCAATCTATGAGGTACAACTTTGGGGTCTATAG 462 0.3766 MIASHLHGRSDNEIKNRWHSQLKKRFQHTSASNSNNHNALIQSTEEEIVNNNHNNNATTNEYPSNNLHNTSPASSQSDTYDDFSPLSDFFYTPAVDLAAPFGNNSVLAIDNDDHYANFLDNMVHSNIVPIGADCVWTQQDYSSPIYEVQLWGL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1218 153 Gene3D - 1 66 - -
Ahy3g1218 153 SUPERFAMILY Homeodomain-like 1 30 IPR009057 -
Ahy3g1218 153 CDD SANT 2 19 IPR001005 -
Ahy3g1218 153 MobiDBLite consensus disorder prediction 52 79 - -
Ahy3g1218 153 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 26 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1218 Ahy-Chr3 19020541 19021002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1218 2 76 MYB Transcription Factor Family AT3G23250 36.585 3.52e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1218 K09422 - gmx:106799185 62.7734