Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1207 ATGGATGAGCAATACCAGGAAGATGATGACATTAACCAACAAGAAGAGCTACTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGTAAAACTTTCAAGAATAGTATTGGCAAAATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGGAGTTGAAATATTACACGATGAAAAAAAGGAAGAAGGAACCTAGATTGGAAATAAGAACTGGGTGTGAAGCCCGAATGGATGTTAAATTTGTACATGAAACTGGAAGGTGGCATATCTTTTATTTCTCTGATGAACACAACCATGATCTATTGGATACACAATTTAGTGCTATGTTGCCTGCCCACAGAAAAATGACAGAGGTAGATATTATGCAAATGATGAACATGTTAAAGTCCGGGATTAGCACTTCACAGATGTTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTATGAATTTATTGGCTATGGTCGCAGAGATATGTACAATGAGATTGATCGGCAAAGGCGTCAAGTTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCTACAATTATATTTCAAGTCTGATAGGATTAGCCAACTAGACTACCAACTCTTTGGAGATGTCATTCCTTTTGATGCTACGTACAAGAAGAACAAGTATAGTTGTCCATTAGTCATATTTAGCGGGGTTAACCACCACAACCAAATAATTGTTTTTGCTGCTGCGTTAATTGTGGACGAAACTACTGATACATATATTTGGCTCCTGCGTCAGCTCATGTTTGCCATGAAGGGTAAGACCCCGACCTCAATAATAACTGATGGGGCCATGACAATTAGGAATGCAGTAAGAGATGTATTTTCCGAAGTCATATATAGATTATGCGCTTGGCACCTTATTCGAAATGCGACTAGCAATGTTGGAAATCCATTGTTTACATCTAAATTCAGGAAAATCATGTTGAGAGACTACGAGATTCCTGTGTTTAAGCGTAAGTGGGTTCAGCTTATTGAAAAATTTGGCCTTGAGGATAAGCCGTGGGTGAACAACATGTATGAAGAGAAGCATATGTGGGCTATTGCATATATAAGAGTTGTGGCAAGGGTGCCCGTCATGCAGACTTGTATAGAGCTGCTAGAGAGATTTGCTGCTGAGAGACATTTGTGA 1194 0.3961 MDEQYQEDDDINQQEELLAFDFYLKYSKSKGFSARKSKTFKNSIGKIYKQKFVCHRQGFRELKYYTMKKRKKEPRLEIRTGCEARMDVKFVHETGRWHIFYFSDEHNHDLLDTQFSAMLPAHRKMTEVDIMQMMNMLKSGISTSQMFGLLASQAGGYEFIGYGRRDMYNEIDRQRRQVPGDAARVLKKLEDMRLKDLQLYFKSDRISQLDYQLFGDVIPFDATYKKNKYSCPLVIFSGVNHHNQIIVFAAALIVDETTDTYIWLLRQLMFAMKGKTPTSIITDGAMTIRNAVRDVFSEVIYRLCAWHLIRNATSNVGNPLFTSKFRKIMLRDYEIPVFKRKWVQLIEKFGLEDKPWVNNMYEEKHMWAIAYIRVVARVPVMQTCIELLERFAAERHL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1207 397 PANTHER OS02G0262500 PROTEIN 19 375 - -
Ahy3g1207 397 Pfam MULE transposase domain 217 311 IPR018289 -
Ahy3g1207 397 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 375 IPR031052 GO:0006355
Ahy3g1207 397 Pfam FAR1 DNA-binding domain 21 111 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1207 Ahy-Chr3 18876234 18878286 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1207 MULE 5.50E-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1207 - - aip:107607175 660.603