Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1203 ATGATGAAGAAGTGCGAACTGTGCAAGGTTAGGGCTAGGACTTTCTGCGAGTCGGACCAGGCTAGCTTATGCTGGACCTGCGACGCTAATGTTCACGGTGCTAACTTCCTTGTGGCTAGGCACTCCAGGACGCTCCTCTGCCGCGACTGTTACTCACTTACGCCGTGGAAAGCCACCGGCGCCGCACTCCTTAACGCCGTTTCCCTCTGCCACAGTTGTTCCAAGGGAGAACAAGAAAAACCAAAAGAAGAAGAGAGCGAAGGGGAAAATAACGACGCGACAGAAATCGACGACGACGACGACGACGGTTTCGAAGATGTGGACGGAGAAAATCAGGTTGTGCCTTGGTGCTCTTCCACCACCCCGCCGCCTCCGCCTTCGAGTTCCGCCGGCAGCGAAGAGTCGGAGTTCGGCGCTGGAGATGGTTTTGACCTGGCGACGTCGTTGAAACGACGGCGTGACGTCGACGCTTCGGATCGTGACCTTCAGGAAGCCTCGAACGCTTCGATTTGTGAGCGGCGGAGGATGGCAGAGGACCACCGCTGA 546 0.5714 MMKKCELCKVRARTFCESDQASLCWTCDANVHGANFLVARHSRTLLCRDCYSLTPWKATGAALLNAVSLCHSCSKGEQEKPKEEESEGENNDATEIDDDDDDGFEDVDGENQVVPWCSSTTPPPPPSSSAGSEESEFGAGDGFDLATSLKRRRDVDASDRDLQEASNASICERRRMAEDHR* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1203 181 MobiDBLite consensus disorder prediction 77 181 - -
Ahy3g1203 181 CDD Bbox1_BBX-like 4 46 - -
Ahy3g1203 181 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Ahy3g1203 181 Pfam B-box zinc finger 3 43 IPR000315 GO:0008270
Ahy3g1203 181 SMART bboxneu5 1 46 IPR000315 GO:0008270
Ahy3g1203 181 MobiDBLite consensus disorder prediction 146 181 - -
Ahy3g1203 181 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 177 - -
Ahy3g1203 181 MobiDBLite consensus disorder prediction 88 108 - -
Ahy3g1203 181 PANTHER - 2 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1203 Ahy-Chr3 18787192 18788540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1203 1 124 C2C2-CO-like Transcription Factor Family AT4G27310 40.854 1.06e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy3g1203 zf-B_box 2.20E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1203 - - gmx:100809520 155.992