Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1171 ATGGCGACCTACGATCTCACGCCTCGGATCGCTCCGAACCTTGACAGGCACCTTGTGTTCCCTCTTCTGGAGTTCCTCCAGGAGCGCCAGCTTTACAACGATGGCGACATCCTCAAGGCCAAGATCGAGCTCCTCAATAACACTAACATGGTTGACTATGCCATGGACATCCACAAGAGCCTCTACCACACTGAAGACGTTCCTCAGGATATGGTGGAGAGGAGGGCGGAAGTTGTGGCGAGGCTGAAGTCGCTGGAGGAAGCAGCTGCGCCGCTGGTGGCATTCCTTCAGAATCCGTCCGCCGTGCAGGAGTTGAGGGCTGACAAGCAGTATAACCTTCAGATGCTCAATGACAGATACCAGATTGGTCCTGCACAAATAGAGGCATTATATCAATATGCCAAATTTCAATTTGAGTGTGGAAACTACTCTGGTGCCGCTGATTATCTTTATCAGTATAGGGCTTTGTGCACAAATAGTGAAAGAAGTCTGAGTGCATTGTGGGGAAAGCTTGCAGCTGAAATACTGATGCAAAACTGGGACATTGCACTTGAAGAGCTGAATCGTTTGAAGGAAATCATTGACTCAAAGAGTTTTGCATCACCTATGAATCAGGTGCAAAGCAGAATATGGTTGATGCATTGGAGTCTGTTCATATTTTTCAACCATGACAATGGAAGAACACAGATAATTGATCTGTTTAATCAGGACAAGTATCTAAATGCAATCCAAACTAGTGCTCCACACCTTTTACGATACTTGGCCACAGCATTCATTGTCAACAAGCGCAGGAGGCCTCAATTCAAAGATTTCATAAAAGTTATTCAACAGGAACAGAATTCGTATAAAGACCCGATCACTGAGTTTTTGGCTTGTGTTTATGTCAACTACGACTTTGATGGGGCACAAAAGAAGATGCGGGAGTGTGAAGAAGTGATTCTCAATGATCCATTCCTTGGTAAACGAGTTGAAGAAAGCAACTTTTCTACTGTACCATTGAGGGATGAGTTCCTTGAAAATGCTAGGCTATTCATCTTTGAGACATACTGCAGAATACACCAACGCATTGACATGGCAGTTCTTGCTGAGAAGTTAAATCTGAATTATGAGGAAGCCGAGAGATGGATTGTGAATCTCATCCGTAGCTCAAAGCTCGATGCCAAAATAGATTCTCAAACAGGAACAGTTATCATGGAACCCAATCATCCCAATGTGTATGAGCAGCTGATTGACCATACCAAGGCTCTTAACGGGCGTACCTACAAGTTAGTTAGTCAACTTTTGGAACATTCGCAGGCGCAGGCAGCTCGTTAA 1314 0.4467 MATYDLTPRIAPNLDRHLVFPLLEFLQERQLYNDGDILKAKIELLNNTNMVDYAMDIHKSLYHTEDVPQDMVERRAEVVARLKSLEEAAAPLVAFLQNPSAVQELRADKQYNLQMLNDRYQIGPAQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNRLKEIIDSKSFASPMNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMRECEEVILNDPFLGKRVEESNFSTVPLRDEFLENARLFIFETYCRIHQRIDMAVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSQTGTVIMEPNHPNVYEQLIDHTKALNGRTYKLVSQLLEHSQAQAAR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1171 437 Pfam PCI domain 285 399 IPR000717 -
Ahy3g1171 437 ProSiteProfiles PCI domain profile. 219 403 IPR000717 -
Ahy3g1171 437 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 435 IPR016650 GO:0003743|GO:0005737|GO:0005852
Ahy3g1171 437 SUPERFAMILY "Winged helix" DNA-binding domain 332 403 IPR036390 -
Ahy3g1171 437 SMART PINT_4 332 416 IPR000717 -
Ahy3g1171 437 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 435 - -
Ahy3g1171 437 Pfam eIF3 subunit 6 N terminal domain 5 137 IPR019010 -
Ahy3g1171 437 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 332 416 - -
Ahy3g1171 437 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 429 IPR016650 GO:0003743|GO:0005737|GO:0005852
Ahy3g1171 437 PIRSF Transl_init_eIF3e 1 437 IPR016650 GO:0003743|GO:0005737|GO:0005852
Ahy3g1171 437 SMART eIF3_N_2 5 137 IPR019010 -
Ahy3g1171 437 Gene3D - 224 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1171 Ahy-Chr3 16992841 16996269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1171 4 437 Eukaryotic Initiation Factors Gene Family AT3G57290 88.018 0.0 810