Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1162 ATGGTTGAACGAAAGCAATTCAAGACAAGGTTATGTGTTCCTTATCAGAGAGGACGCTGCACGCGTCATAATTGCAACTTTGCGCATGGTAATGCTGAGTTGCGAAGGTTCTCTGCCACTTATAATGGGAAGCTCTATTACTATTCATTATTATGTTTCTCAGTTTCTCTTATTATTCCAGTTAATGGTAGGAAAGACTTAGCCAATGACTTGAGGGATACACTAGACAGAAGGTATTTATCACCTCGAAGACACTCACCAACTCGAGATGGTAGAGGACACCAGGCCATTCATGAACACAGTCCGTCAAGATCCATGGAGAAAAAAAGTGACAGAAGACATTGGAGAAAACAGGGCATTACTGGCCAAAGTGATATTTCTGCAAGCTTGAAAGTCTCAGATAGAATTCAAGATCCGGTTAAAGAAGGAAAATTCGTTTCTTCTTGTTCTAGAAATACACTTGAGGAGCAGTTAAAGAAAGTACAATTGGACATCAGGACTTTTGAGGACCGAAAATTCCAACTATCGGTTTACCTGGATGAGAGTGCTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAAGCTCAGTTAGTTAAAGAGAATGAGGAGTGTAAAAGAATCAATTCAGGAATAAGGAAGTTTATCAGAGTGTACAATCATAATTCGCAGCTACAAGAAGAACTGAAGAGATCACAAGTCCGACTTCAAAAGCTTGGTGATCAGCTTGTCTCGGATATTGCTAGAATTGGTGCTGAGGAAGAAGATCTAAGCATTGATATTGTAAGCAATGGTGAGAATAATAGTCATCCTCCAATCCCCAAACATAATGCCGAGCAGAATGATGCATCTCCCCATGGAAAAAAGCTGCATGTGCATGCTGAGCAGGATGTATTGGAAGAGTTAAAACAAGATAGATCAAAAGTTGGGAATTCGGTTGAAACAAGAAGAAACAGGAAGCGATCTCGTTGGAATTTGCCTGCTCAATTGAATGACAAGGATAATGTAGGCCTTGAAACTCCAAACGATGGAACTGAAGATGCTAGGCCTTTAGATATTGAAAGCAAGCAGAAGAGAGGAAAGCTGAATTCTTCTGACAACCTTTCTTCAGAGAAGTTGAAGGAATTTAGGAATGAAATGCCGTCAACAAGCATGGCAGCTCATGTGTTTGACGAGGAAGTTGAGATTGTATTTGATGATAGAATTGACCTCAACGAAACTGCACATACAGAAAATGACAATGAAGTGGTATTAGAGGTGAAGGGCGTACCCCTTATGCTTCCCCCAGCGTTGATTCCCCATACCAATTATTCGCAGTACGAGGGGGACGACGAGAATGTGGACGTGGATGGTCTTGATGAAGGGGGAAATGTGGATATTGTCTGA 1392 0.4109 MVERKQFKTRLCVPYQRGRCTRHNCNFAHGNAELRRFSATYNGKLYYYSLLCFSVSLIIPVNGRKDLANDLRDTLDRRYLSPRRHSPTRDGRGHQAIHEHSPSRSMEKKSDRRHWRKQGITGQSDISASLKVSDRIQDPVKEGKFVSSCSRNTLEEQLKKVQLDIRTFEDRKFQLSVYLDESAQEVDSLNSRIQELEAQLVKENEECKRINSGIRKFIRVYNHNSQLQEELKRSQVRLQKLGDQLVSDIARIGAEEEDLSIDIVSNGENNSHPPIPKHNAEQNDASPHGKKLHVHAEQDVLEELKQDRSKVGNSVETRRNRKRSRWNLPAQLNDKDNVGLETPNDGTEDARPLDIESKQKRGKLNSSDNLSSEKLKEFRNEMPSTSMAAHVFDEEVEIVFDDRIDLNETAHTENDNEVVLEVKGVPLMLPPALIPHTNYSQYEGDDENVDVDGLDEGGNVDIV* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1162 463 Gene3D - 1 36 - -
Ahy3g1162 463 Coils Coil 224 244 - -
Ahy3g1162 463 MobiDBLite consensus disorder prediction 347 363 - -
Ahy3g1162 463 MobiDBLite consensus disorder prediction 264 289 - -
Ahy3g1162 463 MobiDBLite consensus disorder prediction 78 118 - -
Ahy3g1162 463 MobiDBLite consensus disorder prediction 303 323 - -
Ahy3g1162 463 Coils Coil 179 213 - -
Ahy3g1162 463 Coils Coil 151 171 - -
Ahy3g1162 463 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Ahy3g1162 463 MobiDBLite consensus disorder prediction 303 375 - -
Ahy3g1162 463 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 456 IPR045868 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1162 Ahy-Chr3 16427350 16435407 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy3g1162 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1162 - - adu:107477805 878.241