Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1120 ATGGATGAGCAATACCAGGAGGACGATGAAATTAACCAACAAAAAGAGCTATCAGAAGATACTCTTGAAGCTGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAATTTCAATAAAAATTGTGCAGAGGAAATTGGTAAATGTCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGTAAGACTTTCAAGAATAGTATTGACGAGATTTACAAACAAAAGTTTGTATGTCATAGGAAAGGATTCAAGGAGGAGAAATATTACACGATGAAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTAGGTGTGAAGCTCGAATGGATGTTAAATTTGTACCAGAAACTGGAAGAAAAATTTCAAAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCTGGGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAAGCGGGTATGAATTTGTTGGCTATAGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCATCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCATGATTCAAGAGGTTTGTTACATAACTTGTTCTGGTCTGATGGAATTAGCCAACTAGACTACCAACTTGTCCGGGATGTTATTGCTTTTGATGCTACGTACAAGAAGAACTAG 762 0.3819 MDEQYQEDDEINQQKELSEDTLEAAYAVDSVQDITTLNFNKNCAEEIGKCHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIDEIYKQKFVCHRKGFKEEKYYTMKKRKKEPRLETRTRCEARMDVKFVPETGRKISKADIMQMMNMLKSGISTSQIFGLLASQASGYEFVGYSPRDMYNEIARQRHQIPGDAARVLKKLEDMRLKDPQLYFKACHDSRGLLHNLFWSDGISQLDYQLVRDVIAFDATYKKN* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1120 253 Pfam FAR1 DNA-binding domain 60 130 IPR004330 -
Ahy3g1120 253 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 135 IPR031052 GO:0006355
Ahy3g1120 253 PANTHER OS02G0262500 PROTEIN 49 135 - -
Ahy3g1120 253 PANTHER OS02G0262500 PROTEIN 135 253 - -
Ahy3g1120 253 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 135 253 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1120 Ahy-Chr3 14435128 14436066 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1120 FAR1 5.10E-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1120 - - ahf:112773256 513.072