Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1086 ATGCCGAGACGAATCAACAACGACAACAACGAAGACGACAACAACAACCGTGAAGATAATTATAACGATGGAGTAGTAGCAAAAGAGGAGAATGGTGGTGAAAAGAGTTTGAGAGGGAAAACAAAGAAAGGGCCATGGACAGTTTCGGAAGATATAATGTTGAGAGAGTATGTGATGAAGTACGGTGAAGGGAATTGGAACTGTGTGCAAAAGAATTCAGGGTTGGCAAGGTGTGGCAAAAGTTGTAGGCTTAGATGGGCCAATCATCTTAGACCTAATTTGAAGAAAGGTTCATTTTCTAAAGAAGAAGAAGATTTAATTGTTCAACTTCATGCCAAACTTGGAAACAAATGGGCTCGAATGGCCGCACAGCTACCTGGGAGAACAGATAATGAAATAAAAAACTTTTGGAACACTAGAGTAAAAAGATGCCAAAGAGCTGGGTTGCCACTTTATCCACCACAAGTGTTGCATGAAGCCAATGTATACCATCTACAACAACATCTCAAACCTCAACCTTCTTCTTCTTCATCATCATCTTTCTCATTTTCTCCATTATTTATGTCTTCCTCTAACCACCAAGAAATCAATCAACTAAAGCTAATAGCCCACCCTTCTACAAATCAACAAAACCCACCCCATTCCTCTTGTTTATCAAATAATAATCCACAACCATACCCACAATTCAAGTTTCCAAATGAAAACCCTAATATTACAAATAGTGGAAATTTAGGGTTCCCATTATCTCCTATTTCCATAACTTCCTCTTTGTTTAACCAAAGTTATAATAATGTAAATAATAACTCAAATAATGATTATTATCATTTAGGAAGCTATAACTATGGGTTCCACTCCAACAATAGTGATACTAATAATAATAATGTTAAACTAATGCCAAATTCACCATTTGAAGCACTTCCTCCTTTGATTCAAGGTTCAAATAACAATAATGAAGCCTCTTTAAGCCAATCATCACCACCACTTAGCTCAACAACACCTACTTCATCTCATGCTAGCGGTAATAATGGCTACTTAATAGGAGGAGGAGCTTCAAACATGGCTACAAATGGTGACGGCGGCCGCTCCGGAGTTGCGCCGCTTTCGCCGCCTCAAGAAAATGGTGGTGGTGGCTTGTTGGGTGCAGTTTTGGTAGAAGCTCAAAGTCTTTGTAACAATAATGACAAGTCTAAGAGTGACAATGAGGATTCAACTGCATCACAGGTTTTATCTCATAAAAGAAAATACATGGTAACTACTGAGGAATGTACAAAAGAAGAAGAGACTAATAATGTGGTTGTGGAGTCAGATACCAAAAGCATTGGAAATACCATTAATAAAATACCCAAGGTTGATTTGTACTCTTCTCCATTTTCAACAGGGAATAAACAAACAACTGAAGATGAATTGGAGGAAATCAATACCATGGATGATGACTTATTTGGCCTACTTAAAAACTTTCAAGAAATGCCAGTTCCAGATTGGTACCAGAAAAGAGGACAACCATTGGAACTTGAAACTCAACAAGATGCTTCATTGGGCCCCATAGATCAAGCATTTTCAACTCATGACAGTTTTTGGAGAAACATGCCCAAATATTGA 1599 0.3796 MPRRINNDNNEDDNNNREDNYNDGVVAKEENGGEKSLRGKTKKGPWTVSEDIMLREYVMKYGEGNWNCVQKNSGLARCGKSCRLRWANHLRPNLKKGSFSKEEEDLIVQLHAKLGNKWARMAAQLPGRTDNEIKNFWNTRVKRCQRAGLPLYPPQVLHEANVYHLQQHLKPQPSSSSSSSFSFSPLFMSSSNHQEINQLKLIAHPSTNQQNPPHSSCLSNNNPQPYPQFKFPNENPNITNSGNLGFPLSPISITSSLFNQSYNNVNNNSNNDYYHLGSYNYGFHSNNSDTNNNNVKLMPNSPFEALPPLIQGSNNNNEASLSQSSPPLSSTTPTSSHASGNNGYLIGGGASNMATNGDGGRSGVAPLSPPQENGGGGLLGAVLVEAQSLCNNNDKSKSDNEDSTASQVLSHKRKYMVTTEECTKEEETNNVVVESDTKSIGNTINKIPKVDLYSSPFSTGNKQTTEDELEEINTMDDDLFGLLKNFQEMPVPDWYQKRGQPLELETQQDASLGPIDQAFSTHDSFWRNMPKY* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1086 532 MobiDBLite consensus disorder prediction 307 349 - -
Ahy3g1086 532 ProSiteProfiles Myb-like domain profile. 91 141 IPR001005 -
Ahy3g1086 532 SUPERFAMILY Homeodomain-like 42 137 IPR009057 -
Ahy3g1086 532 Pfam Myb-like DNA-binding domain 96 139 IPR001005 -
Ahy3g1086 532 Pfam Myb-like DNA-binding domain 43 90 IPR001005 -
Ahy3g1086 532 MobiDBLite consensus disorder prediction 1 43 - -
Ahy3g1086 532 Gene3D - 42 95 - -
Ahy3g1086 532 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 20 505 - -
Ahy3g1086 532 MobiDBLite consensus disorder prediction 297 378 - -
Ahy3g1086 532 ProSiteProfiles Myb-like domain profile. 38 90 IPR001005 -
Ahy3g1086 532 MobiDBLite consensus disorder prediction 391 411 - -
Ahy3g1086 532 Gene3D - 98 144 - -
Ahy3g1086 532 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 145 IPR017930 -
Ahy3g1086 532 SMART sant 95 143 IPR001005 -
Ahy3g1086 532 SMART sant 42 92 IPR001005 -
Ahy3g1086 532 CDD SANT 45 90 IPR001005 -
Ahy3g1086 532 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 90 IPR017930 -
Ahy3g1086 532 CDD SANT 98 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1086 Ahy-Chr3 13662303 13665260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1086 21 187 MYB Transcription Factor Family AT4G26930 64.118 2.14e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g1086 Myb_DNA-binding 3.70E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1086 K09422 - gmx:100784779 350.903