Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1082 ATGTCCATAAACGAGGATGATGTGAAGAATGATTTTGATAATAATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTATAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGGCAATTTTATAACGCTTATTCTTGTTGGCATGAATTTGTAATGAGGAAGGACGATGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGGTGGATGAATGTGAGGTATCTTGATCTAGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCAACTTAGGGTAAAGCTTGACTATGGCTGCGGGTGGATATCGCATGCTGACTTCACACACAAAGATTTGTACAACCACATTGATTATTATCGTCGGTCGAAAGTTAAAAATGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTCGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCCGGATGCAATCATCACGGGCAGAATGTTATATTCGGCTCCATCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACTTTTGTTGAAGCGATGGGTGGGAAAAGTCCTAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCCTGATGTGACCCATCGGTTATGCGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCTTGCACGATTTTAAGTGTCTTATATACGACAACAATGACCAGAGAGAATTTGATCGGAGATGA 1053 0.4122 MSINEDDVKNDFDNNLGDDFDYQPNAEDDAEDDDVDSLDSTSKSEEVCGIKRIADLMVEDIWNLEFRTEDEAWQFYNAYSCWHEFVMRKDDVVRDNQGRIISRQLVCNKEGWMNVRYLDLDDRSREARSLTRTKCPAQLRVKLDYGCGWISHADFTHKDLYNHIDYYRRSKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQNVIFGSILLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVLPDVTHRLCGWHLQRNACENIKNPNFLHDFKCLIYDNNDQREFDRR* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1082 350 PANTHER OS02G0262500 PROTEIN 165 350 - -
Ahy3g1082 350 MobiDBLite consensus disorder prediction 1 42 - -
Ahy3g1082 350 Pfam MULE transposase domain 226 320 IPR018289 -
Ahy3g1082 350 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 165 350 IPR031052 GO:0006355
Ahy3g1082 350 MobiDBLite consensus disorder prediction 22 39 - -
Ahy3g1082 350 MobiDBLite consensus disorder prediction 1 16 - -
Ahy3g1082 350 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 150 IPR031052 GO:0006355
Ahy3g1082 350 Pfam FAR1 DNA-binding domain 74 149 IPR004330 -
Ahy3g1082 350 PANTHER OS02G0262500 PROTEIN 60 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1082 Ahy-Chr3 13478772 13480003 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1082 MULE 7.90E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1082 - - ahf:112723022 534.643