Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1075 ATGGAGTGGAGTAGAGGACACACTATAGGCCATGGATCCTCAGCTACCGTATCTATAGCCACCCGCCGTGAGGGCTGCCGTGTATTCGCCGCGAAGTCATCGGAGCTATGCAATTCAGAATCTTTACAAAGAGAACAGAGGATTTTATCTTCTCTATGCTCTCCTTATGTGGTTAATTTCAAAGGGAGTGACATAACCATGGAGAACAACAAGCTCTACTACAATCTCTTCATGGAGTACATGCCATTCGGAACCCTTTCCTCGGAAATTAACCGGCACGGCGGCCGGCTCGATGAGGCAAAAATTAAGACCTACACAAGGCAAATTGTGCAGGGGCTAGAGTATATACACTCTAAAGGGTTGGTACATTGTGACATAAAATGTTCCAACATCTTAATTGGCACCGAAGGCGCCAAAATTGGTGACTTGGGATGCGCCAAGAGTGTCGTGGATCCGCGAATCAGCGGCACTCCGATGTTGATGGCGCCGGAAGCGGTGCGGGGAGAGGATCAAGGGTGTGCTAGTGATATTTGGTCACTTGGGTGCACCATAATTGAAATGGCTAAAGGTGAAGCAGCGTGGCCTAATTTGTTGGACCCATTTTGTGTTCTTTATCACATTGCATATTCCGGTGAAGTTCCTGAGATTCCATGGTTTCTATCTGAAGAAGGTAAGGATTTCTTGGGGAAGTGTCTAAGGTGGAATCCAGAAGAGAGGTGTACCGCTACTCAACTTCTTAATCATCCTTTTCTCAATTCCAAGGTGGAATCAAATTCAACATCGCCAACAAGTATTCTTGAGCATGGGTTTTGGAGCTGTGTGGAAGAAGGTTCTCACACAACAAGAACAACAAGCCTTGGGGATTTGCCACCTGACAGGGTTAGAATGTTGGGTTTGTGTTCAGAGGAATCATGTTGGGCATCATGGAATGATGATGGGAACTGGATCACAATTAGAGGGAATGAGTGTGACTCATGGGGTGAAGGGGTTTTTCGTAATTTTGGGTCAGAGACAGCTTCTAGTAGTAATGGTGGTTTGGATCTGAAGGAGTTGGTGGAAAGCAATGTGAGTGGTAGAATTTGGAGTAAACAATAA 1095 0.4584 MEWSRGHTIGHGSSATVSIATRREGCRVFAAKSSELCNSESLQREQRILSSLCSPYVVNFKGSDITMENNKLYYNLFMEYMPFGTLSSEINRHGGRLDEAKIKTYTRQIVQGLEYIHSKGLVHCDIKCSNILIGTEGAKIGDLGCAKSVVDPRISGTPMLMAPEAVRGEDQGCASDIWSLGCTIIEMAKGEAAWPNLLDPFCVLYHIAYSGEVPEIPWFLSEEGKDFLGKCLRWNPEERCTATQLLNHPFLNSKVESNSTSPTSILEHGFWSCVEEGSHTTRTTSLGDLPPDRVRMLGLCSEESCWASWNDDGNWITIRGNECDSWGEGVFRNFGSETASSSNGGLDLKELVESNVSGRIWSKQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1075 364 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 328 - -
Ahy3g1075 364 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1075 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Ahy3g1075 364 Gene3D Transferase(Phosphotransferase) domain 1 2 285 - -
Ahy3g1075 364 CDD STKc_MAPKKK 2 251 - -
Ahy3g1075 364 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 1 328 - -
Ahy3g1075 364 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1075 364 SUPERFAMILY Protein kinase-like (PK-like) 3 268 IPR011009 -
Ahy3g1075 364 Pfam Protein kinase domain 5 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1075 364 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1075 Ahy-Chr3 13340095 13341510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1075 1 321 MAP Kinase Kinase Kinase AT1G05100 49.706 2.16e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy3g1075 Pkinase 1.00E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1075 K20716 - gmx:100819665 428.713