Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1068 ATGGGTTTTCGGTTACCTGGTATTGTAAGAAAGGCATCATTTACTTCATCTTCAAAAGCTATGGAAACTCCAAAAGGTTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCCATATCATACTTGAACCAGCCTTCATTTCAAGACTTGCTAAGTCAAGCTGAGGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCTCGTGAAGAAAATATGTTCTTAGATATCACTTCTCGCTTGAGTTGA 267 0.3858 MGFRLPGIVRKASFTSSSKAMETPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPREENMFLDITSRLS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1068 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 87 - -
Ahy3g1068 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 87 IPR003676 GO:0009733
Ahy3g1068 88 Pfam Auxin responsive protein 16 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1068 Ahy-Chr3 13186284 13186993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1068 22 80 Calmodulin-binding Proteins AT3G43120 54.237 4.12e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1068 K14488 - gmx:100806671 140.969