Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1067 ATGGGTTTTCTTTTGGCTGGTATCAGAAGAAAGTCATCATTTACTGCAAACCAAGCAACTTCCAAAGTTGTGGAAGTCCCGAAAGGCTATCTTGCAATGTATGTTGGCGAGAAGATGAAGCGGTTTGTGGTTCCCATTTCTTATTTGAATCAACCTTTATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGATGCTTTCTTGGACCTCACGTCTCGCTTAAACTGA 276 0.4094 MGFLLAGIRRKSSFTANQATSKVVEVPKGYLAMYVGEKMKRFVVPISYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCSEDAFLDLTSRLN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1067 91 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Ahy3g1067 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Ahy3g1067 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1067 Ahy-Chr3 13184149 13185275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1067 15 83 Calmodulin-binding Proteins AT3G43120 49.275 8.41e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1067 K14488 - gmx:100806671 159.458