LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy3g1066	ATGGGAGGAGATGCTGGACTCTCCATGGATTCCTCCGATCCGATCCGGAGGTTCTTCCTTCGCAGTAATAGCCCTGTTATTCTCAACTCTTTTCCTGAACACAAGTGGAATATGAACCTCAACACGGATCATGAAACCGCCTCTTTTCAACAAGTCAACCTTATTAGTTCTTGTTCTTCGAATCACGATCATCACCACAACACGAGACAAGAGTTAGACTTCTTCGTCACTCACAACGACGACAACCTTATCGCCTCTTCTTCTTTCCCTGCCGCCGACCACGATGACAATCATCGTCATTCCTTGGAATTCAAAGTGAACACTGGTCTGAATCTTCTCACTACCAGCACTACGGAGGACGATCACGTAAATTTGCAAGACAGAAGAACTAAACTTGAGGAGGTAGGTGTAATTGAAGCGGAGATAGAGCGAGTGAAGGAGGAGAATGAGAGGATAAGGGAGATGATTGATGAGGCAAACAGTCATTACAGTGCGCTTCAGATGCACCACATGAATCTGATGAACAAGAGCAGTGATGATGAAAGAGTATTGGTTCCAAGGCAGTTTATGGATCTTGGCTTAGCAACAAATTCGCACAATTGTTCATCATCAAGATCAAGATCAAAATCACCATCAGGGAATAGTAGTGGTGATGGAGAGAAGAAGAGAATGAAAAGAGAAGAAAGCCCGACGAGGGAAGAAGAAGCTAACAAAAGTAGTCCAGCAAAACATAATCTTGACCAAGCTCACGAGGCCACTATGAGGAAAGCTAGAGTTTCTGTTAGAGCGAGATCAGAGGCACCTATGATAACTGATGGGTGTCAATGGCGAAAGTATGGACAGAAGATGGCTAAAGGAAACCCATGCCCTCGAGCTTATTATCGTTGCACCATGGCTTCCGGTTGTCCAGTTAGGAAACAGGTGCAAAGGTGTGCAGAGGACAGAACAGTGTTAGTGACAACATATGAAGGGAAGCACAACCACCCTTTGCCACCAGCAGCAATGGCTATGGCGCAAACAACTTCCTCAGCCGCAACAATGCTTCTTTCTGGTTCATCAATGTCAACCAATGACAACACCACCCTAATCAACAATGCAACAAACTTCTTAGCAACAACACTTCTTCCATCTTCTTCATCATCATCATCAGCTGCTACTTCAACCATGGCAACAATCTCAGCTTCAGCACCATTCCCAACTATCACATTGGACCTTACTCATGATGACTCCCCCAACAACAACAACAACCCTTTTCAGTTCCCAATAAGGCCTAGTACAATTCCACAAATACCCTTCCAGATATTTGGTGGTAATAGTAGTCATAATAATAGCAATAACCAATCAAAGTTTTGTGGTCTACAAATGCCTAATAATAATAATAAAGATCATAGTAATAGTAGTAGTAGTAGTAATAATCTTGTTGATACAGTTGGTGCTGCAATTGCATCTGATCCAAACTTCACTGCTGCTTTGGTATCAGCTCTTAGCTCCTTTATTAGTGCTGCTGCTCCTACTCAACAAAACAACATTAGCAATAGCAATGACAATGGCAATGGCACACTCAACAACAATAGCTAG	1578	0.4309	MGGDAGLSMDSSDPIRRFFLRSNSPVILNSFPEHKWNMNLNTDHETASFQQVNLISSCSSNHDHHHNTRQELDFFVTHNDDNLIASSSFPAADHDDNHRHSLEFKVNTGLNLLTTSTTEDDHVNLQDRRTKLEEVGVIEAEIERVKEENERIREMIDEANSHYSALQMHHMNLMNKSSDDERVLVPRQFMDLGLATNSHNCSSSRSRSKSPSGNSSGDGEKKRMKREESPTREEEANKSSPAKHNLDQAHEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTVLVTTYEGKHNHPLPPAAMAMAQTTSSAATMLLSGSSMSTNDNTTLINNATNFLATTLLPSSSSSSSAATSTMATISASAPFPTITLDLTHDDSPNNNNNPFQFPIRPSTIPQIPFQIFGGNSSHNNSNNQSKFCGLQMPNNNNKDHSNSSSSSNNLVDTVGAAIASDPNFTAALVSALSSFISAAAPTQQNNISNSNDNGNGTLNNNS*	526

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy3g1066	525	ProSiteProfiles	WRKY domain profile.	265	331	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Ahy3g1066	525	MobiDBLite	consensus disorder prediction	403	471	-	-
	Ahy3g1066	525	SUPERFAMILY	WRKY DNA-binding domain	263	331	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Ahy3g1066	525	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	47	519	IPR044810	GO:0003700
	Ahy3g1066	525	MobiDBLite	consensus disorder prediction	506	525	-	-
	Ahy3g1066	525	SMART	WRKY_cls	270	330	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Ahy3g1066	525	MobiDBLite	consensus disorder prediction	431	471	-	-
	Ahy3g1066	525	PANTHER	OS05G0567200 PROTEIN	47	519	-	-
	Ahy3g1066	525	Coils	Coil	135	162	-	-
	Ahy3g1066	525	MobiDBLite	consensus disorder prediction	216	262	-	-
	Ahy3g1066	525	MobiDBLite	consensus disorder prediction	403	423	-	-
	Ahy3g1066	525	MobiDBLite	consensus disorder prediction	195	267	-	-
	Ahy3g1066	525	Pfam	WRKY DNA -binding domain	272	329	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Ahy3g1066	525	MobiDBLite	consensus disorder prediction	195	215	-	-
	Ahy3g1066	525	Gene3D	WRKY domain	255	332	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy3g1066	Ahy-Chr3	13166240	13169006	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy3g1066	71	499	WRKY Transcription Factor Family	AT1G62300	45.267	9.27e-109	333

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Ahy3g1066		WRKY	5.70E-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy3g1066	-		-	ahf:112737496	825.083