Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1027 ATGTTCGAGGCTTGGAGCAGGACGCCTTCGTCTCATCGGTCCCCGTCGTGTCGTCGGTCGCCGTCCGGTTCTCCGTCGAAGGTTGTTGGTAGAATGGAGGAGGAAGATGTAGCCTCGTTAGTTCATGGTGCACCGGCCATGGCCGATGAAGTTTCCTTTGTCGGGAACGAAGAAGAACTAGTTTCCGATGAGCCATATGTTTGTGTAGGCGATGAACCTTCATCAGAGGCAAGTGAGGATGCGAATATGGACGGGTATTGTGGCTATAATGATGGTGATGATTTTTACGAAAGCTGGGAAGACAGAGGCATTGATGGGATTGCTGACTTTGGCCGAATTAACTTTAAAGAAATAAGTTTTGATGAGATGAGATTGCTACATTTTCCCGATCGACATGTAGCTTTTGCTTTCTACAATTTATATGCAAAAATGAATGGGTTCGCCGCAAGGAAGACCAGGCTAAGGCAAAATGCCAAGAAACTGGCGACACAACAGCAGTTTGTTTGCTTTAGGCAGGGGTTCAGAGAATTTGCCGCGGATAAGGAGGCATACGAACGTAAGCGGGAGCCTAAGCCTGAGACTAGATGTGGCTGTTTGGCGCAGATGCGTGTTCATCTACATTTGGAGAGTGGTAGATGGATTATTTCATACTTTGATAATGTTCACAACCATGAGATGCTCGACGGAACACTTACATTTATGCTCCCTGGTCATAGGAAGATGAATTCTACCGCAATTGAACAAATGAACATGATGTTGAGAGTCGGGATTAAAACACCACAGATATATTCAGCATTTGTGCATACTGCAGGGGGCTTCCAAAATGTACCATTTTTGAAGAGAGACATGTACAACCAGATTGATAAACAGAGAAAGCTAATAGGGGGCGATGCGGTGTCTTGTCTTCGGTGGTTGGAATCATATGCAGAGGAGAATCCTGGAACGTTTGTGCGTTACTTAGCAGACAAAGAGAATCGTTTGGTGCACCTTTTTTGGTCTGATAACTGTAGTCAATTAGATTACCATGTGTTCGGAGATGTTGTAGCATTTGATGCAACTTATCGAAAGAATAAGTACATGTGCCCACTGGTTGTGTTTTCTGGCGTAAATCACCATAACCAAACCATTATTTTCGCTGCTGCCCTTGTTGCAAATGAGAGTGAGGAGACATATTCTTGGCTACTTGAAAGATTTTTGGAAGCTATGAAGGGGAAAGCTCCTGCGTGTGTTATCACAGATGGGCACGCGGCAATGAGAAAGGCGATTGAAAAGGTATTTCCTATGGCTTATCATCGTCTCTGTGCATGGCATCTCCTTCGGAATGCAACATCACATTTGGCAAATCCAGCATTCACTTCTGAGTTTAAGAAATGCATGCTTTTTGATTATGAGGTTTCAGAGTTTGAAGCCAGGTGGGAGAGATTGGTCACTGAGCTTCAGCTTCAGGATAATCAGTGGGTCTGTGACCTTTATGATCGGAGGAAAATGTGGGCAACGGCTCACATTCATGGCCACTTTTTCGGTGGATTTCGGACGACATCAAGATGCGAGGGTTTGCATTCGATGCTTGGTAAGTTTGTCCACTCTCGCCATAATTTGAGGAACTTTGTTGAACAATATTTTCGCTGTGTATCAGAGATGAGATCTCGGGAAGCACAATCCGATATGCATAGCGTGGTTGGACACTTGGTGTTGCAAAGTCCGTTACATGATTTGGAAAGGTCTGCTGCAAAGTTACTAACGAGGGAGATATTTATCTTGTTTCGGCCCATGCTGTCCCGTGCATGTACATTAAAGGTCCGGTCTTGTACATTGACTCCGACATCGGACATATACACCATTTCACGGTGGGGCAATTCACACAACAACTGGCATGTTTCGCACTATCCCGAGGATTCAATATTTAAATGCTCTTGTTTAAGGATGGAATCCCTTGGAATACCATGCGATCACATTGTAGCTCTTCTTGTACATCTTGATTTCACGGAAATCCCAACAAGTCTTGTTTTGGAGAGGTGGTCTAAGAACGCTCGGTCGAAGGTGAGGCAATATGTTGAGAAGGGACCGTTTAGTTGGGACTCTATGGTAAGTTGTCGCAATTGGATGCTGAACGACCTATGTAGGGAGATGTGTGTGCTTGCTTCAGTGAGGGAGGATAAATTTGAAACAATGACTGAGAAGATACGCAGTGAGATCAATCGATTAAAGCATGACACCGAAGCTGGGCCTTCGACACCCGCGGTTGTTGGCCAATCATCCACACTCGAGGGGTGCGTTCAAAACCCACTTGTTGTGCGTCGCAAGAAGAGGCCAAAGAGGGACTCAGTTAACCGTACCTTGGTTAGGGGTGTGAGACGGTGTAGCATTTGTCATCGGGTTGGGCATAATCGAACTTCTTGCCAGTCAAATGTTTGGCAGGGCCAGCGGCAGCAGCCTAGCCACGAGGAAGACGTCGATGAAGATAACTACTACACTCTTAACTTTGGGGAGGAAGTTGATGATGAGTATGCTCATTATCATTCTCAACCCGTGGGGCAAGAGGAACACTTTGGCCGGTATGAAGAGGAGTTCCAAGTGCCATTGACGGATCCTTATTATAGTTGGCATGAGTAG 2613 0.4558 MFEAWSRTPSSHRSPSCRRSPSGSPSKVVGRMEEEDVASLVHGAPAMADEVSFVGNEEELVSDEPYVCVGDEPSSEASEDANMDGYCGYNDGDDFYESWEDRGIDGIADFGRINFKEISFDEMRLLHFPDRHVAFAFYNLYAKMNGFAARKTRLRQNAKKLATQQQFVCFRQGFREFAADKEAYERKREPKPETRCGCLAQMRVHLHLESGRWIISYFDNVHNHEMLDGTLTFMLPGHRKMNSTAIEQMNMMLRVGIKTPQIYSAFVHTAGGFQNVPFLKRDMYNQIDKQRKLIGGDAVSCLRWLESYAEENPGTFVRYLADKENRLVHLFWSDNCSQLDYHVFGDVVAFDATYRKNKYMCPLVVFSGVNHHNQTIIFAAALVANESEETYSWLLERFLEAMKGKAPACVITDGHAAMRKAIEKVFPMAYHRLCAWHLLRNATSHLANPAFTSEFKKCMLFDYEVSEFEARWERLVTELQLQDNQWVCDLYDRRKMWATAHIHGHFFGGFRTTSRCEGLHSMLGKFVHSRHNLRNFVEQYFRCVSEMRSREAQSDMHSVVGHLVLQSPLHDLERSAAKLLTREIFILFRPMLSRACTLKVRSCTLTPTSDIYTISRWGNSHNNWHVSHYPEDSIFKCSCLRMESLGIPCDHIVALLVHLDFTEIPTSLVLERWSKNARSKVRQYVEKGPFSWDSMVSCRNWMLNDLCREMCVLASVREDKFETMTEKIRSEINRLKHDTEAGPSTPAVVGQSSTLEGCVQNPLVVRRKKRPKRDSVNRTLVRGVRRCSICHRVGHNRTSCQSNVWQGQRQQPSHEEDVDEDNYYTLNFGEEVDDEYAHYHSQPVGQEEHFGRYEEEFQVPLTDPYYSWHE* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1027 870 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 131 753 IPR031052 GO:0006355
Ahy3g1027 870 SMART 26again6 635 662 IPR006564 GO:0008270
Ahy3g1027 870 PANTHER OS02G0262500 PROTEIN 131 753 - -
Ahy3g1027 870 ProSiteProfiles Zinc finger SWIM-type profile. 624 660 IPR007527 GO:0008270
Ahy3g1027 870 MobiDBLite consensus disorder prediction 1 33 - -
Ahy3g1027 870 MobiDBLite consensus disorder prediction 7 23 - -
Ahy3g1027 870 Pfam MULE transposase domain 347 441 IPR018289 -
Ahy3g1027 870 Pfam FAR1 DNA-binding domain 137 227 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1027 Ahy-Chr3 12569824 12573897 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1027 MULE 5.10E-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1027 - - ahf:112717731 1104.74