Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1022 ATGGCAACGTACTTTCATGGCGGCAACAATAACAACAACAGTGGCAGTTCGGATATTCATCATCATCAATCTTCCGCAGAAGGAGGGGGATTGCAGACACTGTTCCTCATGAATCCAAACAACTACGTACCTTTCTCCTCTGACACCGCACAAAATCCAACACCAAACATGCTCTTCCTCAATCCCAACAACAGTACTACTACTCCCCACGCGCTCAACCTTGCAAGTCTCTCTCACGCGCCGCCCCAACAACAAATTATCGGAGTTGCTTCAAATAATATCCTAGGACCTGCCGGCGGTGGCAATGAGATCTCCGGCTTCCATGGCTTTGTGGGGCCCACACCACGTGTTCATCACTACAATTGGAGATCCATCATGGATCAAACTGATCTTTCTTCTTCCTCTTCTTCTGTTGTTGCAGCAACCGTGACTGTTCTTCCGAATAATTATTCGGAACATACAGTCACAACTGCAACAACAGAAATGGAATTTCATAGAGCGAGAGTCCATCAATCCCATCATCATCCGCAAGGGTTGTCACTTAGTCTTTCCTCTCAACAACTTCCGTTTAGGTCTTTTTCCAACGCCGGTGGGGCTTTGAATAGTGTTGTACTTGGATCCAAGTTTCTGAAAGCGGCACAGGAGCTTCTTGATGAAGCCGTTAACGTGGGTAACGATAATAAGGTGGATTATTCCAACAATAAAGAGAAGATGAAAGGGAATAAAAATGTTGAATCCACGTCTGATGGTGGCGGTGATGATAATAGATCAAGTGGTGGCGGCAGCGGCGGTGAAAATAGTGGTGGTGACAACAAGGAAGGAAGTGAACTCAACACTGCTCAAAGACAAGAACTTCATATGAATAAGTCCAAGCTTGTTACCATGCTTGATGAGGTGGAGCAAAGATACCGAGAGTACAAACAACAAATGCAAATTGTGACGTCATCATTTGAGGAAGCAGCTGGTTATGGAGCTGCAAGAGCATACACAGCACTTGCATTGAAGACAATATCGAAGCAATTTCGGTGCCTAAAAGATGCAATTTGTTTGCAGATCAAAACGACGGGCAAGACGCTAGGTGAAGACAACTGCATGGGAGTTAAAATGGAGGGTTCAAGGCTTAGATTCATTGATCACAATCTCCGGCAACAAAGGGCGCTTCAACAGTTGGGAATGATACAACACAATGCTTGGAGACCACAAAGAGGATTGCCCGAACGAGCGGTTTCTATTCTTCAAGCTTGGCTTTTCGAACATTTTCTTCACCCTTATCCAAAGGACTCCGATAAGGTTATGCTTGCAAGACAAACTGGACTTACTCGGAGCCAGGTATCAAACTGGTTTATAAATGCCCGAGTTAGGCTATGGAAACCAATGGTTGAAGAAATGTACTTAGAAGAAATTAAGGATCAACAACACAACAACAATAATGGCTCCCAAGATGATGATGATGATGACATTGACACCACCACCAACAAGAAGAAGAAGAAGAAGCTAATAAGAGAATCATCAAACAAGGAATTATGGTCATCATCATCATCACAATTAGAACAACCACCATGTAGTAGTAGTGCCATTAGACTTGACCACTTAAACACCAACCAAAACAACACTACTCCAATGACTGAGATCTCACCAAATTCCAACAACAATAACAATTCAATCTCAACATCTCCATTGAATCTAAGGAATCCTCATCATGAGATTATGAACTCTCCAGCAGGTAGCATCCTTTCTGTGGACATGGAAATGAAGCCGATAAGAGAGACAAATAGCAACAACAACAACGTCAATTTTGGAATTGAATTAGGGAACCCTAATAAAGACGGTTACCCTTTAATGGCTTCTTTTGGGAATGAAAACCACGACGGTGGCGGCGGTAGCGGTAGCGGTTATGGTTCTACTACATTCTCCATGGATGACATTGGAAGGTTCCATCAACAATTGGTGGCTCCAAGGTTCCATGGGAATGGTGTTTCACTCACTCTAGGGCTTCCACCAAGTGATAACAACAACACCAACAATAACTTTCCATCGCAACAAGTAGGGTTTCTCTCCTCACACAACATGCATTTGGGAGGAGGAAGGATTCATCATCATCATCACGAGATTGAAGCAGCAACCAATGATGACGAGTTTTGTGGAATGAAGAACAATGCCACAACACCTTCTTCTCATTCAGGAACAAGTTATGATCATAATAACAACAACATTGACATGCAAAATCCCAAGAGGTTTGCTTCTCATCAATTGTTGCGTGATTTTGTGGCCTAG 2274 0.4327 MATYFHGGNNNNNSGSSDIHHHQSSAEGGGLQTLFLMNPNNYVPFSSDTAQNPTPNMLFLNPNNSTTTPHALNLASLSHAPPQQQIIGVASNNILGPAGGGNEISGFHGFVGPTPRVHHYNWRSIMDQTDLSSSSSSVVAATVTVLPNNYSEHTVTTATTEMEFHRARVHQSHHHPQGLSLSLSSQQLPFRSFSNAGGALNSVVLGSKFLKAAQELLDEAVNVGNDNKVDYSNNKEKMKGNKNVESTSDGGGDDNRSSGGGSGGENSGGDNKEGSELNTAQRQELHMNKSKLVTMLDEVEQRYREYKQQMQIVTSSFEEAAGYGAARAYTALALKTISKQFRCLKDAICLQIKTTGKTLGEDNCMGVKMEGSRLRFIDHNLRQQRALQQLGMIQHNAWRPQRGLPERAVSILQAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQQHNNNNGSQDDDDDDIDTTTNKKKKKKLIRESSNKELWSSSSSQLEQPPCSSSAIRLDHLNTNQNNTTPMTEISPNSNNNNNSISTSPLNLRNPHHEIMNSPAGSILSVDMEMKPIRETNSNNNNVNFGIELGNPNKDGYPLMASFGNENHDGGGGSGSGYGSTTFSMDDIGRFHQQLVAPRFHGNGVSLTLGLPPSDNNNTNNNFPSQQVGFLSSHNMHLGGGRIHHHHHEIEAATNDDEFCGMKNNATTPSSHSGTSYDHNNNNIDMQNPKRFASHQLLRDFVA* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1022 757 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 25 685 - -
Ahy3g1022 757 MobiDBLite consensus disorder prediction 719 745 - -
Ahy3g1022 757 MobiDBLite consensus disorder prediction 471 559 - -
Ahy3g1022 757 MobiDBLite consensus disorder prediction 225 275 - -
Ahy3g1022 757 MobiDBLite consensus disorder prediction 719 744 - -
Ahy3g1022 757 Coils Coil 289 316 - -
Ahy3g1022 757 Pfam Homeobox KN domain 415 454 IPR008422 GO:0003677|GO:0006355
Ahy3g1022 757 SMART HOX_1 398 462 IPR001356 GO:0003677
Ahy3g1022 757 CDD homeodomain 398 459 IPR001356 GO:0003677
Ahy3g1022 757 MobiDBLite consensus disorder prediction 1 26 - -
Ahy3g1022 757 ProSiteProfiles 'Homeobox' domain profile. 395 458 IPR001356 GO:0003677
Ahy3g1022 757 Gene3D - 394 472 - -
Ahy3g1022 757 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 25 685 - -
Ahy3g1022 757 SMART prehox3 198 350 IPR006563 -
Ahy3g1022 757 Pfam Associated with HOX 203 348 IPR006563 -
Ahy3g1022 757 MobiDBLite consensus disorder prediction 244 275 - -
Ahy3g1022 757 MobiDBLite consensus disorder prediction 505 559 - -
Ahy3g1022 757 SUPERFAMILY Homeodomain-like 399 465 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1022 Ahy-Chr3 12451025 12457969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1022 1 757 Homeobox Transcription Factor Family AT2G35940 38.662 2.03e-117 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy3g1022 POX 1.60E-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1022 - - aip:107629786 878.241