Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1012 ATGTCCTCCAAGGACTGCGGCCACCACGAAGACGAGAGCCGCAAGCTCATCCGCCTCATCCTGTTTGGCATCGGCGGCTTCTTCTTCGTAGTCCTCCTCACAATATTCATCATATGGGCCGTCCTCAGGCCCACCAAGCCCAAATTCACAATCCAAGACGCCACACTGTACGCCTTCAACCTCTCCTCCCCCGCCACCAACACCCTCACCATCACCATGCAAGTCACCCTCTCTTCCCACAATCCCAACCGCCGCATCGGAATCTACTATTCCAACCTCCACGCTTACGCCTCCTACCATAACCAACAGGTAACGCTTGCGACCGAGCTTCCCCCAACGTACCAAGGACACAAAGATTTCACCGTTTGGTCGCCGTTTCTTTTCGGCGCCGCAGCGCCGGTGTCGCCGTTTACGTTGAGTTCGTTGCAGCAGGACCGGGGTGCGGGTGCCGTCGTGGTCAACGTCAAGATCTACGGAAGGGTCAAGTGGAAGGTGGGGACTTGGGTCTCTGGAAGGTACCATTTGTTCGTGAACTGCCCGGCGTATATAAGGTTCACCGGCGCCGGTGATCGGAGCGGCAGCGGGATCCAGATTGTGGCTCCGGCGAAGTTTCAGCTCTTGCAGGGTTGCAGTGTTGATGTTTAG 645 0.5705 MSSKDCGHHEDESRKLIRLILFGIGGFFFVVLLTIFIIWAVLRPTKPKFTIQDATLYAFNLSSPATNTLTITMQVTLSSHNPNRRIGIYYSNLHAYASYHNQQVTLATELPPTYQGHKDFTVWSPFLFGAAAPVSPFTLSSLQQDRGAGAVVVNVKIYGRVKWKVGTWVSGRYHLFVNCPAYIRFTGAGDRSGSGIQIVAPAKFQLLQGCSVDV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1012 214 PANTHER OS05G0367900 PROTEIN 6 214 IPR044839 GO:0098542
Ahy3g1012 214 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
Ahy3g1012 214 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1012 Ahy-Chr3 12047688 12048918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1012 41 157 SNARE and Associated Proteins AT1G32270 27.119 6.20e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1012 - - gmx:100819285 297.36