Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0989 ATGCAGCCCAGTAGTAGTGGCAGTGGCGGTGGTGGTAGCAGCGGTGGTGTTGCCAGGTTCCGTTCAACTCCAGCGAGCTGGTTAGAATCAATTTTTGTCAAGGAAGAAGTGGAAGGAGAAGGAGAAGAAGAAGCTGATCCTCCGGCGTTGAATAGCAGCAGCAGCAGCATCCACCAGGGATTCACTCAGCTTCTTTCCGGTGACACAAGCGGGGTTTTCCGCCACAATAGTTCTCCCGCCGATTTTGTATTCGACTACTCTCAACAATACGTATCCTCCAACTACGACTACGACTACGCCTATGCTTCTCCGGATAACAGCAGCGCGAATAATCCAATCCCGCAGGAAATTAAGCAGAGAGGGGTGAAAGTGGAGAATAAGATTATGAAGGATTCTGTGCCTTGGAAAGTTCGAGCAAAGCGTGGCTGTGCTACTCATCCTAGGAGTATTGCTGAAAGGGTTAGGAGGACTCGTATCAGTGATCGTATCAGGAAGCTGCAGGAACTTGTGCCAAACATGGATAAGCAAACTAACACTGCAGACATGTTAGATGAGGCAGTAGCTTATGTCAAGTCTCTCCAAAAGCAAATTGAGGAACTATCAGAGCAGCAACGGAGATGTAATTGTGTGGTTCAAAGGAGTAGGGAGATGTAA 654 0.4817 MQPSSSGSGGGGSSGGVARFRSTPASWLESIFVKEEVEGEGEEEADPPALNSSSSSIHQGFTQLLSGDTSGVFRHNSSPADFVFDYSQQYVSSNYDYDYAYASPDNSSANNPIPQEIKQRGVKVENKIMKDSVPWKVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKSLQKQIEELSEQQRRCNCVVQRSREM* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0989 217 Coils Coil 183 210 - -
Ahy3g0989 217 MobiDBLite consensus disorder prediction 33 57 - -
Ahy3g0989 217 MobiDBLite consensus disorder prediction 1 20 - -
Ahy3g0989 217 PANTHER TRANSCRIPTION FACTOR BHLH117-RELATED 12 207 - -
Ahy3g0989 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 193 IPR011598 GO:0046983
Ahy3g0989 217 Pfam Helix-loop-helix DNA-binding domain 148 194 IPR011598 GO:0046983
Ahy3g0989 217 Gene3D - 144 216 IPR036638 GO:0046983
Ahy3g0989 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 211 IPR036638 GO:0046983
Ahy3g0989 217 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 207 - -
Ahy3g0989 217 SMART finulus 149 199 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0989 Ahy-Chr3 11680335 11683889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0989 57 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 48.619 4.44e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy3g0989 HLH 7.10E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0989 - - adu:107477635 373.244