Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0949 ATGGAATATGCAATGATTCGTTCTTCTAACTCCAAGTGTGTTGCGACAATCCTTCTGGTAATTGTTTTAACCATCATAAATTGTGGTGAAGCGAAAGGGAGAGAATTCCGACAATCAAACACAGTATTCATTAGAAGCTCATGTAGCTCCACAACATACCCAAAACTATGCTACACTTCGCTGGTGAAGCATGCGGCATTCATTCAAACAAACCCTGTTCTTCTAACGGGGACAGCCCTCAATGTCACTCTTTCCTCGGCAAAATCGACCTCGGCCGCCATGTCCACGATGGCGAGGAGCGGCGGCCTGAGTGGGAGAGACGCGGCGGCTATGCAGGACTGCATGGAGGTGCTGGCTGATTCCGTGGAGGAGCTCACAAAATCGATTGGAGAAATGAGTCATTTGAGGACAAGTAATTTTGAAGGAACAATGAGTGATGTTCAAACTTGGGTCAGCGCTGCTTTGACCGATGATACCACCTGCACTGATGGCTTCCAACAGACCCCTAGTTCTGTCGCCGAAGATGTTAAGACCGCCGTCCGTGGCCGCGTCGTCGAGGTGGCGCAACTCACTAGTAATGCCTTGGCTTTGATCAATCAGCTCGCTAATGGCCATCCTTAA 621 0.4928 MEYAMIRSSNSKCVATILLVIVLTIINCGEAKGREFRQSNTVFIRSSCSSTTYPKLCYTSLVKHAAFIQTNPVLLTGTALNVTLSSAKSTSAAMSTMARSGGLSGRDAAAMQDCMEVLADSVEELTKSIGEMSHLRTSNFEGTMSDVQTWVSAALTDDTTCTDGFQQTPSSVAEDVKTAVRGRVVEVAQLTSNALALINQLANGHP* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0949 206 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 201 IPR006501 GO:0004857
Ahy3g0949 206 CDD PMEI-like_3 46 203 - -
Ahy3g0949 206 Pfam Plant invertase/pectin methylesterase inhibitor 43 197 IPR006501 GO:0004857
Ahy3g0949 206 SMART PMEI_2 39 197 IPR006501 GO:0004857
Ahy3g0949 206 PANTHER PECTINESTERASE INHIBITOR 10 15 200 - -
Ahy3g0949 206 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 200 - -
Ahy3g0949 206 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 201 IPR035513 -
Ahy3g0949 206 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 203 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0949 Ahy-Chr3 11003984 11004944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0949 3 203 Carbohydrate Esterase AT3G05610 27.053 1.94e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0949 - - gmx:100305537 231.491