Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0945 ATGGAGAATATGAATAGTTTTTGTCATGTTCCCCCGGGTTTTAGATTCCACCCCACGGATGAAGAACTTGTTGATTACTACCTTAGGAAGAAGGTTAGTTCAAGGAAGATTGAGCTTGATGTAATCAAAGATGTTGACCTCTACAAAATTGAGCCATGGGACCTTCAAGAGATATGCAGGATAGGAAGAGAAGAGGAGAATGAATGGTACTTCTTTAGCCACAAGGATAAGAAGTATCCAACAGGAACAAGAACAAATAGGGCAACAGCAGCTGGGTTTTGGAAAGCAACGGGAAGAGACAAAGCTATATATTCAAAGCATGATCTCATAGGGATGAGGAAGACATTAGTCTTTTATAAAGGTAGAGCTCCTAATGGACAAAAATCCGATTGGATCATGCACGAATATCGCCTTGAAACCGATGAAAATGCCGCACCACAGGCAAGTTTAATTCTATATTTTTCGGTCATAGAAATATTTGCATACATACATAATTAA 498 0.3896 MENMNSFCHVPPGFRFHPTDEELVDYYLRKKVSSRKIELDVIKDVDLYKIEPWDLQEICRIGREEENEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENAAPQASLILYFSVIEIFAYIHN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0945 165 Gene3D NAC domain 19 159 IPR036093 GO:0003677|GO:0006355
Ahy3g0945 165 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 146 - -
Ahy3g0945 165 SUPERFAMILY NAC domain 7 145 IPR036093 GO:0003677|GO:0006355
Ahy3g0945 165 Pfam No apical meristem (NAM) protein 11 138 IPR003441 GO:0003677|GO:0006355
Ahy3g0945 165 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 7 146 - -
Ahy3g0945 165 ProSiteProfiles NAC domain profile. 10 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0945 Ahy-Chr3 10904374 10907102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0945 4 147 NAC Transcription Factor Family AT1G12260 86.806 1.29e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy3g0945 NAM 1.30E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0945 - - ahf:112737392 311.997