Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0941 ATGGACTTGAAATCAAATCACACCCCTGTTCTTGCTGATGCTGCACCCATAACAAAGTCAAGACTGGGTGTGCATTCAAGTTTATTGCCTTACTCCCCAACCGGGGCGACCTTTCCACATGGTATGCTTTTGACTATCCCAAGGAAGAAAACTGGACTTCTTGAGGATGTTCGTTCTAGTAGTTGGTTGGATGCCATGAAATCATCTTCTCCTCCCCCCAGGAAGATAACGAAGGATGTTAGTCATGGCTTTGCGTCACATGAATCTGATGCTGCTTATTTTAACTGGCTGCTAAAGTATCCCTCAGCTCTTACATCTTTTGAGCAAATTACAAACTATGCAAAAGGGAAGAGAATAGCCTTGTTTCTGGATTATGATGGAACTCTTTCCCCGATCGTCGATAATCCTGACTGTGCTTTCATGTCTGACAATATGCGAGATGCTGTTAAAAAGGTGGCTGAATATTTCCCTACTGCTATTATCAGTGGAAGAAGTCGTGACAAGGTATATGAATTTATAGGACTAACAGAACTCTATTATGCTGGTAGTCATGGTATGGACATCATTGGTCCTGTCAGGCAGGCTGTACCTGATAACCACCCTAATTGCACCATTAGGTCTACTGACAAGCAGGGTAAGGAAGTTAATTTATTCCAACCTGCTGCTGAGTTCTTGCCCCTGATTGATGAGGTCTTTGAGTCTCTTGTTGAGAGTACGAAAGATATTAAAGGAGCAAAAGTTGAAAACAATAAATTTTGTGTGTCTGTACATTACCGCAATGTAGATGATAAGAGTTGGGATTTGGTGGGGCAGATTGTCCATGATATTCTGAAGGGCTATCCACGTTTGCGACTAACTCATGGGCGCAAGGTCTTAGAGGTCCGCCCAGTGATTGACTGGGATAAGGGAAAAGCAGTCACGTTTTTGCTCGAGTCACTTGGGCTTAGCAATTGTGATGATGTGCTTCCTATATATATTGGAGATGACAGAACAGATGAAGATGCATTTAAGGTTCTGAGGGAGGGAAATAAAGGTTATGGGATCTTAGTGTCCTCAGCGCCAAAAGAAAGCAATGCAGTTTACTCTCTCCGTGATCCATCAGAGGTGATGGAGTTTCTCAAGTCTCTTGTGGAAACATGCCAAGAGGTTTCCTGCAGCAGGTTTGCGCACAGAAGACCTCTTATGGTAGCTACAACCTTGTCGCTACCTTGTTGTTTTGTTCAAACTTCAAATCTCCTTTGGCAATTGTAA 1251 0.4309 MDLKSNHTPVLADAAPITKSRLGVHSSLLPYSPTGATFPHGMLLTIPRKKTGLLEDVRSSSWLDAMKSSSPPPRKITKDVSHGFASHESDAAYFNWLLKYPSALTSFEQITNYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRDAVKKVAEYFPTAIISGRSRDKVYEFIGLTELYYAGSHGMDIIGPVRQAVPDNHPNCTIRSTDKQGKEVNLFQPAAEFLPLIDEVFESLVESTKDIKGAKVENNKFCVSVHYRNVDDKSWDLVGQIVHDILKGYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNAVYSLRDPSEVMEFLKSLVETCQEVSCSRFAHRRPLMVATTLSLPCCFVQTSNLLWQL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0941 416 SUPERFAMILY HAD-like 120 379 IPR036412 -
Ahy3g0941 416 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 340 IPR006379 -
Ahy3g0941 416 Pfam Trehalose-phosphatase 122 367 IPR003337 GO:0003824|GO:0005992
Ahy3g0941 416 Gene3D - 119 207 IPR023214 -
Ahy3g0941 416 Gene3D - 228 390 IPR023214 -
Ahy3g0941 416 CDD HAD_TPP 120 371 - -
Ahy3g0941 416 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 379 - -
Ahy3g0941 416 TIGRFAM T6PP: trehalose-phosphatase 218 377 IPR003337 GO:0003824|GO:0005992
Ahy3g0941 416 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 379 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0941 Ahy-Chr3 10866993 10872875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0941 113 376 Trehalose Biosynthesis Gene Families AT1G70290 25.887 1.24e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0941 K01087 - gmx:100819495 684.1