Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0930 ATGTTGTTGCAATCCCATGCTGATAGCAATATGATTAATCTCTCCACTATTGCGGCACGAGAAAGTTCAAGAGGGGATTCCGGCGGTATTGATAGAATGTTGAACCAACTATTAACAGAGATGGATGGAATGTCTGTTAAGAAAACATTGTTCACCATTGGAGCAACAGACAGACCTGACATTATAGACCCTGCATTGCTTCGGTCAAAACGTCTTGACCAATTGATATACATTCCTTTACCGGATGAGACATCACGTCCCCAGATCTTCAAAGCGTGCTTGAGGAAGTCACCAATCTCAAAGGACGTCGATCTTTCGGCTCTTGCTCGTTATACACATGGATTTAGTGGTGCAGACATTACTGAGATATCATCACGAGCTCCCGATCTGATAAAGACAGTTCTGACTGGAAGCGAAAGCGATCAGAGGAGTGGGTCGTGGTAG 444 0.4437 MLLQSHADSNMINLSTIAARESSRGDSGGIDRMLNQLLTEMDGMSVKKTLFTIGATDRPDIIDPALLRSKRLDQLIYIPLPDETSRPQIFKACLRKSPISKDVDLSALARYTHGFSGADITEISSRAPDLIKTVLTGSESDQRSGSW* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0930 147 Pfam AAA+ lid domain 102 126 IPR041569 -
Ahy3g0930 147 Pfam ATPase family associated with various cellular activities (AAA) 19 80 IPR003959 GO:0005524|GO:0016887
Ahy3g0930 147 Gene3D - 17 80 IPR027417 -
Ahy3g0930 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 129 IPR027417 -
Ahy3g0930 147 PANTHER AAA-FAMILY ATPASE 15 128 - -
Ahy3g0930 147 Gene3D - 81 127 - -
Ahy3g0930 147 PANTHER CELL DIVISION CYCLE PROTEIN 48 HOMOLOG 15 128 - -
Ahy3g0930 147 CDD AAA 31 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0930 Ahy-Chr3 10660747 10661828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0930 31 127 Calmodulin-binding Proteins AT3G56690 48.454 3.40e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0930 K13525 - ahf:114927445 288.115