Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0912 ATGGAAGCTGCCGTGGTTGACGTCGGGACTAAGCTCCTCAAAGCTGGTTTCGCAATTCCTGATCAGTCTCCTGCCATGATAATTCCCACTCAGATGAAAAGAGTGCTTGATGATGGTGGGTCTGTGAGTGACGATAATTCAATAGCTGATAGTGTTACTGTTGATCCAGTGGTGCGAGGGTTTGTCAGAGATTGGGACGCCATTGAGGATTTATTGCATCATGTCTTGTATACTGGCCTTGGATGGGAAATTGGCAATGAAGGACAGATATTATTCACAGATCCACTTTGTACCCCCAAGGCCAACAAGGAACAGCTAGTGCAATTAATGTTTGAAACATTCAACATATCAGGGTTTTATGCCTCAGAACAAGCAGTTTTATCACTGTATGCTGTGGGACGTATCTCAGGGTGCACAGTTGATATTGGACATGGAAAAATAGATATTGCGCCAGTAATTGAGGGTGCTGTCCACCACATTGCATTGAGAAGATTCGAGTTTGGAGGTACTGATCTAACTAATTTCTTGGCACAAGAACTTGGGAAATCCAATCCACAAGTAAATATCAGCTTGTTTGATGTGGAGAGAATAAAAGAGCAATACTCATGTGCTGCTGAAGATGAATTAGCTTATCAAAAGACTGTTTCATGTCCTGTGGAGAAACATACACTTCCTGATGGACAGGTCATAACAATTGGGAGGGAAAGATATACTATTGGCGAAGCTTTATTCCAACCAAGTCTGTTGGGTTTGGAGGCTCATGGCATTGTTGAGCAGCTTGTCCGTGCTGTTTCAACAGTGTCACCTGATAATCATCGGCAGCTGCTGGAAAATACGGTGGTTTGTGGGGGCACTTCTTCTATGACCGGTTTTGAAGATAGATTTCAGAAGGAATGTAGCTTAAGTTCGTCTGCCATTCAACCTGCTCTGGTTAAGCCTCCAGAGTACATGCCAGAGAACTTAAGCCAATATTCTGCATGGGTGGGAGGTGCGATACTTGCCAAAGTAGTTTTCCCTCAAAATCAACATATAACCAAGGGAGATTATGATGAAACTGGACCTTCCATTGTTCACCGGAAATGCTTCTGA 1089 0.4343 MEAAVVDVGTKLLKAGFAIPDQSPAMIIPTQMKRVLDDGGSVSDDNSIADSVTVDPVVRGFVRDWDAIEDLLHHVLYTGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVHHIALRRFEFGGTDLTNFLAQELGKSNPQVNISLFDVERIKEQYSCAAEDELAYQKTVSCPVEKHTLPDGQVITIGRERYTIGEALFQPSLLGLEAHGIVEQLVRAVSTVSPDNHRQLLENTVVCGGTSSMTGFEDRFQKECSLSSSAIQPALVKPPEYMPENLSQYSAWVGGAILAKVVFPQNQHITKGDYDETGPSIVHRKCF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0912 362 SUPERFAMILY Actin-like ATPase domain 133 362 IPR043129 -
Ahy3g0912 362 SUPERFAMILY Actin-like ATPase domain 2 140 IPR043129 -
Ahy3g0912 362 SMART actin_3 1 362 IPR004000 -
Ahy3g0912 362 Gene3D Actin; Chain A, domain 4 167 253 - -
Ahy3g0912 362 PRINTS Actin signature 47 69 IPR004000 -
Ahy3g0912 362 PRINTS Actin signature 102 115 IPR004000 -
Ahy3g0912 362 PRINTS Actin signature 127 146 IPR004000 -
Ahy3g0912 362 PRINTS Actin signature 218 234 IPR004000 -
Ahy3g0912 362 CDD NBD_sugar-kinase_HSP70_actin 35 168 - -
Ahy3g0912 362 Gene3D - 5 356 - -
Ahy3g0912 362 PANTHER BNACNNG31150D PROTEIN 1 361 - -
Ahy3g0912 362 Gene3D - 125 325 - -
Ahy3g0912 362 Pfam Actin 2 362 IPR004000 -
Ahy3g0912 362 PANTHER ACTIN 1 361 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0912 Ahy-Chr3 10415567 10419008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0912 5 362 Cytoskeleton Gene Families AT3G18780 38.400 4.10e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0912 K16615 - gmx:100813266 662.914