Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0899 ATGAAGCGATTGAGGTCAAGCGAAGATCTCCACTCGTACGGTGACAAGAATGGCTGCAAGGATTCGAATCTGAACCGGTCATTTTCGTCGTCGCAGCGAAACTTCTACTATAAGCCTGACAGTGCACCGCGGAAAGGCTCGCTATCTTCGTCATCGTCTTCTCGCCATGACAGAGATCGAACGTTGGATGAGGATCGGGAGGGTTCAAGGGTGATTCGGAAGCGATCGGAACATGATTTCGACGGTTTCGATCGGAGGAAGGGGTTTGATCGGTACAGAGACGGTGGCGGTTACGGCGGCGGTGGAGGAGGAGGAGATAGAAGTTTGATTCACCGGTCAGAGAGCTTCTGCGGAGGTTCGAGGAGGGAGTTTCCGAAGGGGTTCCGGTCGGAGAGGGACCGGCCGAGGAGGGAAGGCAGCGTGTCTTCGTGGCGGAGAGGGTTGAAGGATTTTGATGAGAACGGTGGCGGAAGCAGAGGGAGTAGTAGAGTTTCTTCGACGGCAGAGGAGAGGGTGGTGAGGTCGCCGAAGGGTTTGAGGGATGTGAAGTCGCCGACATGGTCGAAGGACTCAGAAAGTGAGCAATCGAAGAAGAGGTCTTCGTCTCCGAGAGTATCGCTGAGAGATGACAAGTCCAAGTCCAAGTCTAAGTCACCAACTTGGTCCAAGGACTCAGAAAGTGAGCAATCAAAAAGTTGTGAGCGGTCCAAGAGTGTTGAGCAGTTTAAGAGCGTTGAGCAGTCTAAGAATGTTGAGCAACCCAAGAGTGTTGAGCAGTCGAAGAGCATTGAGGTGAAGAAAACCGAGGAGTTGCAGGTTCAGAGTGGAAGCAGCAGTGAAATGGAAGAAGGGGAGTTAGAACCTGAGCCTGCTCCTGCTCCTGTTCCTCAGGCTGAACCAGAGGCGGCTCTCAAAGTTGCTTCTGAAAGTGAAGAACGCAAGGATTCTGCCCTTTTGGAGAATGCTGAGAAGGAAGTCATGAATGAATGTGAGGTCAATGCTACAAAGGCTGCAAAGGGCGATACACAATTATATGAGGAAAAACCTAATATGGACATTGATTCTGAGGTGAAAAATGCAGAAAAGGAAGCCGATAAGGTGCAAGATGTTCAAGACAATCCTGCGAAGGATGTTCCTGTTGCTAATACTGAAGTCAAACTGGCTCGTGATGTTGTTAATAGAAAAGAGGAGTGTTTGAAGGCTGACGATTCTGAGTGCAAGGAGGAAACAAAGAAGGATGCATATTTGGCGATGTCTGTGGTTAACGAAGAGGAGCAGAAACAGGACAAGGCTGTAGATTTAAAAGCTAGCGCAGGTCTTGACAAACCAGAGTTAAATGATGAAGTCTCAAAAGAGAATGAAGCTCCAAAAGAAGTGAATAGGGAATTCATGGCGGAGGGTGTGGCCAACAACATCAAGGATAAAGGGAAAAGCGTCTCTGTTACCCCAACTAATGTTGCCCATTCTTCAGAAGATGGCTTGTGGACTGATAGAGGATCAAGAGATCTTGCCACATGCTCTGCTGATGTTATGGACGGCCCTAGCACCAGAGGATTCGAGTTATTTTCTAGATCTCCTGTCAGAAAACCGGAGAAAAAGGAGCAGTCAGGTCTCAGCAAGAAGGATGATGGTCTTGGAATGGAGCAGCTTGATCTTTCTCTTAGCTTACCAAATGTTCTGTTACCTATTGGTTCTCATGAGATGGCAACGCAAGCCCCTGGATCCCCCAGTCAAGCTCGGAGTGTGCAGTCTTTAAGTACTACATTTTGTACCAACTCAGATGGTTTTACTGCATCAATGTCTTTTTCAGGTTCCCAATCTCTCTACCACAATCCAAGCTGTTCTCTAACAAAAAATGTAGTTGACTATGAACAATCTGTTGGCAGCCGCCCCTTATTTCAGGGAATTGATTGGCAAAGCCTATCTCAGAATGATCCCAAACATAAAGAAGTTCCTTATAGCAAGATAACTTCTGCAAATGGAAATGGTTCATTTTACCAATCTCAAGCATCATGGGGTGTTTTAGATGGTCAAGTTGTGAAGGGTCAACAATCTAGGGTCCTAGAAGGAAGCTCAAAAATGGGCAGCGGACTTGACAGGCAATTGAGTTTTCAGAAGCAGTTTTCGGGACAGTCAAGACGCCATGATGATGTTAGATCTCCTACACACAGTGCTGGGTCTCATGACATTGGGTCAAATTATAGTCGTGAGAAAAAGGGGGAAGCCAAGGATAGGAGTAGTGGTAGTTTGTATCGAACTACTAGCCAAAAGGAGCAAGAACAAATTCTGATGGGTGGAATTGACTTTGTTGAGACTATCATTGCAAAACTGGTTTCTGAACCAGTGAATGCGACGACTCGAAAGTTCCATGAAATGGGAGGACAGCCTGTAGCGTTTCTGAAGGAGGGCATTAGGGAAATCATGCTTAATCCAGATAAGCACGGGCAAATACTTGCTTTTCAAAAAGTTCTGCAGAATAGGTCTGACATAACCGTGGATGTCTTACTAAAGTGTCATCGAGTACAACTGGAAATTTTGGTTGCTTTAAAAACTGGTTTAACCCATTATCTTCACATAGACAACAGCATTCCATCTTCTGATTTAGCTCAAGTTTTTCTGAACCTAAGATGTAGGAATCTTTCATGTCGAAGCCAATTGCCTGTGGATGAATGCGATTGCAAGGTTTGTACACAGAAGAGTGGTTTTTGCAGGGAATGCATGTGTCTGGTGTGTTCTAAGTTTGACAACGCATCAAATACATGTAGTTGGGTTGGGTGTGATGTTTGCCTTCACTGGTGTCATACTGACTGTGGGTTACGGGAGTCTTATATTAGAAATGGTCACAGTACTACTGGGACAAGAGGAATGACAGAGATGCAGTTTCATTGTATTGCTTGTGATCACCCGTCTGAGATGTTTGGCTTTGTCAAGGAGGTGTTTCAAAATTTTGCAAAAGATTGGCCAGTTGAAACCCTCTGCAAGGAGCTTGAATATGTGAAGAGAATTTTTAATGCCAGCAAGGACATGAGAGGGAGACAACTGCATGAGATTGCAGATCAAATGCTACCAAGGCTGGTAAACAAGTCGAACCTTTCTGAGGTTTTGAGGCACGTAATGTCTTTCCTTGTTGATGGGGATTCTTCCAAATTAGCCATGGCTACAAACTTATCTGGGAAGGAACGAAGTAAGGAAATCAAAGGGGTAGCTGGGCCAAGCCAGGAAGCTTCTTGGCTGAAATCTACTTATTCGGAGAAGAAACCTGTGTTAGAAAGGCCAGCAAACATCCTTACCAGCTTTGATCAAAATGATAAAAGGACACTGGCGCCTGAGCTGCAAATGAGCATTGTCCCAAAAGACTTCTGTTTTGATGAATTGGAGAGTGTAGTTAAAATCAAACAAGCAGAGGCTAAAATGTTTCAGTCACGTGCTGATGATGCAAGAAGAGAAGCTGAAGGGTTGAAACGTATTGCCCTTGCAAAGAGTGAGAAAATTGATGAAGAGTATACTCAGCGAATTGCGAAGCTGCGACTGGGTGAGACAGAGGAAATGCGTAGGCAGAAACTCGAAGAACTTCAAGCATTAGAACGGGCACATCTGGAGTATTTCAACATGAAAAGGAGAATGGAGGCAGACATTAAAGATCTTTTATCTAAAATGGAAGCTACTAAAAGGAGTCTTGCCCTGTGA 3687 0.4532 MKRLRSSEDLHSYGDKNGCKDSNLNRSFSSSQRNFYYKPDSAPRKGSLSSSSSSRHDRDRTLDEDREGSRVIRKRSEHDFDGFDRRKGFDRYRDGGGYGGGGGGGDRSLIHRSESFCGGSRREFPKGFRSERDRPRREGSVSSWRRGLKDFDENGGGSRGSSRVSSTAEERVVRSPKGLRDVKSPTWSKDSESEQSKKRSSSPRVSLRDDKSKSKSKSPTWSKDSESEQSKSCERSKSVEQFKSVEQSKNVEQPKSVEQSKSIEVKKTEELQVQSGSSSEMEEGELEPEPAPAPVPQAEPEAALKVASESEERKDSALLENAEKEVMNECEVNATKAAKGDTQLYEEKPNMDIDSEVKNAEKEADKVQDVQDNPAKDVPVANTEVKLARDVVNRKEECLKADDSECKEETKKDAYLAMSVVNEEEQKQDKAVDLKASAGLDKPELNDEVSKENEAPKEVNREFMAEGVANNIKDKGKSVSVTPTNVAHSSEDGLWTDRGSRDLATCSADVMDGPSTRGFELFSRSPVRKPEKKEQSGLSKKDDGLGMEQLDLSLSLPNVLLPIGSHEMATQAPGSPSQARSVQSLSTTFCTNSDGFTASMSFSGSQSLYHNPSCSLTKNVVDYEQSVGSRPLFQGIDWQSLSQNDPKHKEVPYSKITSANGNGSFYQSQASWGVLDGQVVKGQQSRVLEGSSKMGSGLDRQLSFQKQFSGQSRRHDDVRSPTHSAGSHDIGSNYSREKKGEAKDRSSGSLYRTTSQKEQEQILMGGIDFVETIIAKLVSEPVNATTRKFHEMGGQPVAFLKEGIREIMLNPDKHGQILAFQKVLQNRSDITVDVLLKCHRVQLEILVALKTGLTHYLHIDNSIPSSDLAQVFLNLRCRNLSCRSQLPVDECDCKVCTQKSGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSTTGTRGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDWPVETLCKELEYVKRIFNASKDMRGRQLHEIADQMLPRLVNKSNLSEVLRHVMSFLVDGDSSKLAMATNLSGKERSKEIKGVAGPSQEASWLKSTYSEKKPVLERPANILTSFDQNDKRTLAPELQMSIVPKDFCFDELESVVKIKQAEAKMFQSRADDARREAEGLKRIALAKSEKIDEEYTQRIAKLRLGETEEMRRQKLEELQALERAHLEYFNMKRRMEADIKDLLSKMEATKRSLAL* 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0899 1228 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1227 IPR004082 -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 305 325 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 360 382 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 732 746 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 173 242 - -
Ahy3g0899 1228 Coils Coil 1205 1225 - -
Ahy3g0899 1228 Pfam Coiled-coil region of Oberon 1100 1216 IPR032535 -
Ahy3g0899 1228 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 987 1006 IPR004082 -
Ahy3g0899 1228 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 868 889 IPR004082 -
Ahy3g0899 1228 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 842 857 IPR004082 -
Ahy3g0899 1228 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 788 810 IPR004082 -
Ahy3g0899 1228 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1123 1143 IPR004082 -
Ahy3g0899 1228 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 827 842 IPR004082 -
Ahy3g0899 1228 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 914 934 IPR004082 -
Ahy3g0899 1228 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1162 1184 IPR004082 -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 524 545 - -
Ahy3g0899 1228 Pfam PHD - plant homeodomain finger protein 877 1000 IPR032881 -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 51 93 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 18 37 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 243 258 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 1 325 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 1 16 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 474 545 - -
Ahy3g0899 1228 CDD PHD_OBE1_like 907 966 - -
Ahy3g0899 1228 PANTHER PROTEIN OBERON 4 1 1227 - -
Ahy3g0899 1228 Coils Coil 350 370 - -
Ahy3g0899 1228 Coils Coil 1129 1156 - -
Ahy3g0899 1228 Coils Coil 1177 1197 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 116 153 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 424 460 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 705 755 - -
Ahy3g0899 1228 MobiDBLite consensus disorder prediction 475 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0899 Ahy-Chr3 10249611 10254447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0899 877 1025 PHD Gene Family AT5G57380 27.517 4.67e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0899 - - gmx:100817003 1560.04