Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0893 ATGTCGATGGAACAAGCAATTTGTGAAGGCGCATCGTACGGCATAGCATATGATGATAGTGATCAGTATAATTCTTGCGACGTCAATGTTCCATCGCTTAGTGAAGATGACACACATGTGGACAAGGGGAAAGAATCTGGAAGCGTTATTGAAGTAGTGGATGATGCAATGGCAGTGATTCATGAGTTACCCGATCACACTGGAATTCCATTAGATGAAATCCCGTACGTAGGATTGAGATTTGTTTCCTTGCAGCAAGCACAAGAGTTCTACACTAATTATGCAAAGAAAGTTGGCTTCGTGACCAGGATTAGGAATACTAACTTTGACAAGACCAGGAAGGATTCAAAGATACCCGTTAACCAATCGTTACACTGTAGTCGTGAAGGTTATCGGGAATCTCGAGTGAAGGCAGCAACTCGGGTGAAGAGAATAACAACAGCCGGTTGCAAAGCAAGGATGTACGTCATGCTTGATAGGCAGAAGGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAACAAGTTGTGCACTATACTGAGTACAGGGAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGGCATACGGCCCAACAAGACTTATCTTGCACTAGCAAACGAAGTTGGTGGCTCGTCGAATTTGGGTTACTCAGAAAAGGATGTGAGGAACTTCATTACAAGCAATTTGCGCTTTGATGTAGACGAAGCTAACCAGTTTAAAAGTGCGCTCTGGGTAGATGCAAGATGCAGGGCTTCCTATGAATATTATGGTGATGTGCTTGCTTTTGGTAATCTTGGTTGGATTTATTACAAGCACGGACTTTCATTTGCATCTTTTGTTGGCGTTAACCATCATGGCAAGTCCACTCTGCTCGGATGTGCTTTGATGGGAAATGAGAAAATTCATTGCTTCGAGTGGGTCTTTAAGCAATGGTTAAGGTGCATGGGATCTCCCCCACAGGCCATAATCACGGACCAGTGCAAATCCATGTTTGGTGCTATCAAGAATGTCCTTCCAGATACTCGCCACCGATGGTGCATATGGCACATAATGAAGAAGATACCGCATAAGCTCGGAGGATATGCTCGATATAAAGAAATAGATGATATAATGCATGGCACTGTTTGGAATGCCAGGTCTGTGGAATCTTTCGAAAAGGATTGGGCTGCATTCATTGTTGAGTTTAACTTGGAGCGAAATAGATGGCTATCAGGTTCGTTCTATTTTTGTGCTTTTATATTCCTCTTTGATAGTGGGTTTGTTATGGAATCTCTGTATGGTGATTATAAATTTGTTTCTGTTGGTTATGTAGACCTTTATGACGAACGTCGAATGTGGGTTCCAATTTATTTTCAAGGTGAATTTTGGGCAGGTATGAGAAGTACTCAACGGAGTGAGAGCATGCACGCTTTTTACGGTGGTTACTTGCATTGCAAGAATGGACTGGTTCAGTTCGTGCATGAGTATGACAACGTGCTTGGGAACAAGGAGCAAAAGGAACTGGAAGATGATGCTGCAGACTCTAAAGGAGTTGTTCCTTGTTCATCGAGTACTACAATTGAAAGACAATTTCAGCGTGAATACACAACCTCTAAGTTTAGGGAAGTACAACAGGAATTCAGGAAAAAAGGGGATTGTTTAGTAAAAGGTGCGATTCACGAGGGTGATTTATTTCGTGTAATCATGAAAGAGCAATACATGTTATATGGGGAACCTAGGTCCTGGAATAATATTGTCGAGTTTGACCCATCGACACACAAGATTCGGTGCGAGTGCAACATGTTTGCATCGAGAGGTATTATTTGTTGTCACTGTCTTGCTGTTTACTTTTATTACGGAGTAGACAGAGTACCATCTTGCTATGTTCTCCCTCGATGGAGCAAGAATGTACAACGGAAACACACTTTCATTAAGAGTAGCCATGACGAGAAGCGATCAGATGAAAGCCACAGCTTATTTAGAAGACTGTGTACGCACTTCTTTAATGTGGCACAGGAATTCGTGACATGCGAAGAAGAGGCGGCCATGTTACATTTGGGTCTTGACGAGTTAAGGGCGAAGTTGGTTGATTATCGTGCGAACTTGGGGTCCAGAAGTGTTCCCAATACAGATAACAACATGGTGACACAGTCTGACCCAGCTTGTGTTGCAATAGAGATTCTAGGTCCCTCTAAGGTTGCAACAAAGGGTCGACCGAGACTGAAGAGGCGTGGATCTGAACTGGACACATCCATTAAGAGATCTATGCGAAGAAAGAAGAATAATCCACATCAGGAAAATAATGGAGCAATCAATCCAAACATAGTGGCGGTTCCTGCTCTGAGCACGAATGAATCACATGGAAATGGCGGGTTCTTGTCTTTGTTACACTCATTCCGACATAGTTAG 2427 0.431 MSMEQAICEGASYGIAYDDSDQYNSCDVNVPSLSEDDTHVDKGKESGSVIEVVDDAMAVIHELPDHTGIPLDEIPYVGLRFVSLQQAQEFYTNYAKKVGFVTRIRNTNFDKTRKDSKIPVNQSLHCSREGYRESRVKAATRVKRITTAGCKARMYVMLDRQKDNWMVSKLELKHTHPCSAKQVVHYTEYRELTMHAKCVIQNNDEAGIRPNKTYLALANEVGGSSNLGYSEKDVRNFITSNLRFDVDEANQFKSALWVDARCRASYEYYGDVLAFGNLGWIYYKHGLSFASFVGVNHHGKSTLLGCALMGNEKIHCFEWVFKQWLRCMGSPPQAIITDQCKSMFGAIKNVLPDTRHRWCIWHIMKKIPHKLGGYARYKEIDDIMHGTVWNARSVESFEKDWAAFIVEFNLERNRWLSGSFYFCAFIFLFDSGFVMESLYGDYKFVSVGYVDLYDERRMWVPIYFQGEFWAGMRSTQRSESMHAFYGGYLHCKNGLVQFVHEYDNVLGNKEQKELEDDAADSKGVVPCSSSTTIERQFQREYTTSKFREVQQEFRKKGDCLVKGAIHEGDLFRVIMKEQYMLYGEPRSWNNIVEFDPSTHKIRCECNMFASRGIICCHCLAVYFYYGVDRVPSCYVLPRWSKNVQRKHTFIKSSHDEKRSDESHSLFRRLCTHFFNVAQEFVTCEEEAAMLHLGLDELRAKLVDYRANLGSRSVPNTDNNMVTQSDPACVAIEILGPSKVATKGRPRLKRRGSELDTSIKRSMRRKKNNPHQENNGAINPNIVAVPALSTNESHGNGGFLSLLHSFRHS* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0893 808 Pfam SWIM zinc finger 600 625 IPR007527 GO:0008270
Ahy3g0893 808 ProSiteProfiles Zinc finger SWIM-type profile. 588 626 IPR007527 GO:0008270
Ahy3g0893 808 MobiDBLite consensus disorder prediction 740 777 - -
Ahy3g0893 808 PANTHER OS03G0843700 PROTEIN 60 668 - -
Ahy3g0893 808 MobiDBLite consensus disorder prediction 746 770 - -
Ahy3g0893 808 Pfam FAR1 DNA-binding domain 89 178 IPR004330 -
Ahy3g0893 808 Pfam MULE transposase domain 285 366 IPR018289 -
Ahy3g0893 808 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 668 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0893 Ahy-Chr3 10172065 10175307 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g0893 FAR1 4.80E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0893 - - ahf:112772717 1682.54