Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0872 ATGGGGTACCTCAGTTTCTCTTGCAGAGCTGAATCCGCAGTTTCAACCTCCAATTCTCTCACACCATCACCTTCTTCTTCGTCTTCTTCCACCACCACCACCTCAAAGAAACAGAACAACAAAGAAAAAGAAAAACCCATCAAGATCCAACACTTCCATTACAGTGACCTTGAAGCTGCCACGAATGGCTTCTCAGAGCGCAAGCTCCTCGGCAAAGGAAGCCATGGTTATGTCTATAAAGCTGTTGTACGTGGCCGTCCTGTGGCAGTGAAAAGACCATCAAGACCCCATCATCCTAATTTACCTCCAAAACCATCGCCAATGGTTTCTTCTTCTTCTTCCTCTGCATCTGCACCAGAGTTCATCATCAGCAACAACGAGGTTGACAACGAGATCGATATCTTGTCCAAAATCCAGAGCCCGAGGCTGGTGAACTTGGTTGGTTTCACAAATGATTCACAGGACAGGCTTCTGGTTGTTGAGTTCATGAGCAATGGAACACTCTATGATGTTCTTCATTCTTCTTCTTCTAATAATAACAATAACAACAAGCTTCCGAATTGGGGAAGAAGGGTTCGTTTGGCATTGCAAACTGCAAAGGCAATTGATACCCTTCATTCATCAACACCACCTGTGATCCACAGAGATATTAAATCAGCAAATGTTCTGATTGATAGAAACTTCAATGCAAGGTTAGGTGATTTTGGTTTGGCTCTTATGTGCCATGTTGATGATTATAGACTAAGGTCAACTCCACCAGCTGGCACAATGGGGTACCTTGATCCTTGTTATGTTACTCCTGATAATTTGAGCACTAAAAATGATGTCTTTAGTTTTGGGATTTTGTTGCTTGAGATTATTAGTGGAAGGAAAGCCATTGATGTAACATATTCGCCACCTTCTATTGTGGATTGGGCCATTCCATTGATAAAGAAAGGGAAGCTTATGAGTGTTTATGATCCAAGGATTGCTCCTCCTAAGGATCCTATTGTGAGGAAGCAATTGGCTTTGATTGCTGCAAAGTGTGTTAGGAATTGTAGGGAGAGAAGGCCTTCCATGAGTGAGATTGTGAATTGGCTCAATGGTTTGTGTAAATTGGTTCCTCTTCATTCATGGAATGGTTTCAATAATCCTTGCATGATGGTTGAGACTATGGGAAGGCCAGTTGAAGCAGCAACAAGAAATGATTCTAATAATAATAATGAGAAAGACAAAATGAGTTCAAGATTGGAACTTGATTTCTTGGATGAGAGGTTGTCTAAATCTGCAATGAGGTATTCAAGGAGGGTCTATTCTGATTTGGGATTTAGTAGTAACTTGATGGATCTTATGGCTACAACTGAGGAGCCTGAGTTTCTAAGAGATGCTGATGGTAATGGTAATGGTAATGGTGTTTTGGAGCATAGTTCAAGTTGTAAATCTGCTGAACAAGTTTCTTCTTCAAGCTCAAGGTTTGGAAGTGGAAGGTATTTCACAAAAGGAAGAAACTTTTATAAGCCTTGTGGTACTTATAAGGATGTATTGGATTTGAGTAAAGGTCAAATTGTTGTTGGTAATGGTGGTGATGATAATGGTGCTTCTTGTTCTAATTTGAATTCTCTTGCTGCTGAGGCTGTTTAG 1620 0.408 MGYLSFSCRAESAVSTSNSLTPSPSSSSSSTTTTSKKQNNKEKEKPIKIQHFHYSDLEAATNGFSERKLLGKGSHGYVYKAVVRGRPVAVKRPSRPHHPNLPPKPSPMVSSSSSSASAPEFIISNNEVDNEIDILSKIQSPRLVNLVGFTNDSQDRLLVVEFMSNGTLYDVLHSSSSNNNNNNKLPNWGRRVRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALMCHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKNDVFSFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKKGKLMSVYDPRIAPPKDPIVRKQLALIAAKCVRNCRERRPSMSEIVNWLNGLCKLVPLHSWNGFNNPCMMVETMGRPVEAATRNDSNNNNEKDKMSSRLELDFLDERLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFLRDADGNGNGNGVLEHSSSCKSAEQVSSSSSRFGSGRYFTKGRNFYKPCGTYKDVLDLSKGQIVVGNGGDDNGASCSNLNSLAAEAV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0872 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Ahy3g0872 539 Gene3D Transferase(Phosphotransferase) domain 1 163 368 - -
Ahy3g0872 539 SMART serkin_6 64 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0872 539 MobiDBLite consensus disorder prediction 13 48 - -
Ahy3g0872 539 ProSiteProfiles Protein kinase domain profile. 64 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0872 539 MobiDBLite consensus disorder prediction 13 36 - -
Ahy3g0872 539 MobiDBLite consensus disorder prediction 88 115 - -
Ahy3g0872 539 Gene3D Phosphorylase Kinase; domain 1 33 162 - -
Ahy3g0872 539 SUPERFAMILY Protein kinase-like (PK-like) 47 372 IPR011009 -
Ahy3g0872 539 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 515 - -
Ahy3g0872 539 PANTHER OS01G0750732 PROTEIN 1 515 - -
Ahy3g0872 539 Pfam Protein kinase domain 65 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g0872 539 ProSitePatterns Protein kinases ATP-binding region signature. 70 91 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0872 Ahy-Chr3 9867366 9869329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0872 23 361 Receptor kinase-like Gene Family AT3G59420 40.922 2.06e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Ahy3g0872 Pkinase 1.00E-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0872 - - adu:107477472 983.015