Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0856 ATGGAGCAATTCACAAGCCAACCTCTTTCGTCTTCGAGCAAGAAGGATGATAGAAGGCTCATAGAGAGCCATAGAAGGATCCTGATGAAGAACCTCTACTCCAAACTCAACTCTCTTCAACCTAATTCTAACACCAAGAAAGCGTTGCCGGATCAACTGGATGAAGCCATCAACTACATAAAGAGCTTAGAGGAGAAGGTGAAGATGGCTGAGGACAAGAAACAGTCCTTATTGGTTGGAAAGAAAAAGAGGTCGCGTCCTGCTGAATGCAGCAGCAGCTCCTTCACCGATTCAATGGCGGCTTCTACTTCTCTTGAGCTTGTTATGGCAACTTGCTTGGATACGCAGTTCATGTTCAATGAGATCATTCGCGTGCTGCACGAAGATCACCACATCGATTTCGTGCACTCAGACCTTATAGCCAAGCTCATGGACAAGCTGTTGATCCTTTGA 453 0.4592 MEQFTSQPLSSSSKKDDRRLIESHRRILMKNLYSKLNSLQPNSNTKKALPDQLDEAINYIKSLEEKVKMAEDKKQSLLVGKKKRSRPAECSSSSFTDSMAASTSLELVMATCLDTQFMFNEIIRVLHEDHHIDFVHSDLIAKLMDKLLIL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0856 150 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 9 129 - -
Ahy3g0856 150 MobiDBLite consensus disorder prediction 1 20 - -
Ahy3g0856 150 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 63 IPR011598 GO:0046983
Ahy3g0856 150 Gene3D - 6 91 IPR036638 GO:0046983
Ahy3g0856 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 80 IPR036638 GO:0046983
Ahy3g0856 150 Coils Coil 53 80 - -
Ahy3g0856 150 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 129 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0856 Ahy-Chr3 9683694 9684243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0856 10 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 31.293 5.92e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0856 - - ahf:112772648 287.345