Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0839 ATGGCTAACAATGTCACTAACCGGTTCCATCAATCTCTCACTCGAAATGCTCTTCGCTCTTATCTCGCCGAGTTCATGTCCACTTTCTTCTATGTTCTTGCCGTTGTTGGTTCTGGAATGTCCGCACGGAAATTGATGCCTGATGCAACACTGAATCCGGCTACCCTTGTTGTGGTTGCCATTGCAAACGCTTTCGCCTTGTCGTCCGTGTTGTACACCGCATGGGACATCTCCGGTGGACACGTCAACCCGGCGATTACGTTTGCAATGGCAATAGGAGGCCATGTTAGTGTACCAACCGCTCTCTTTTATTGGGTTGCCCAACTTATAGCCTCTGTTATGGCTTGCCTTGTCCTTAGGGTCATCCTTGTTGGAATGCATGTTCCGACATACACAATTGCTGAAGAAATGACAGGGTTTGGAGCATCGGTACTAGAAGGTTTCTTGACATTTGTATTGGTGTACACAGTGTATGCAGCAAGGGACCCAAGGCGTGGTCCATTGAGTGCTACAGGACCACTTGTAATTGGACTCATGGCCGGTGCAAATGTGTTAGCCGCAGGTCCTTTCTCTGGAGGCTCAATGAACCCAGCATGTGCTTTCGGCTCTGCCGCCATTGGTGGCAGTTTCAGGAACCAAGCCGTGTATTGGGTTGGTCCCTTGCTTGGTGCTGCCGTGGCTGGCCTTCTCTATGACAATGTAGTCTTCCCAGTAACCGCAACAACTGGAGTTTCTGATGGACTTACTGTGTGA 753 0.498 MANNVTNRFHQSLTRNALRSYLAEFMSTFFYVLAVVGSGMSARKLMPDATLNPATLVVVAIANAFALSSVLYTAWDISGGHVNPAITFAMAIGGHVSVPTALFYWVAQLIASVMACLVLRVILVGMHVPTYTIAEEMTGFGASVLEGFLTFVLVYTVYAARDPRRGPLSATGPLVIGLMAGANVLAAGPFSGGSMNPACAFGSAAIGGSFRNQAVYWVGPLLGAAVAGLLYDNVVFPVTATTGVSDGLTV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0839 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy3g0839 250 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy3g0839 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy3g0839 250 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy3g0839 250 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy3g0839 250 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy3g0839 250 PANTHER AQUAPORIN TIP5-1-RELATED 4 242 - -
Ahy3g0839 250 Pfam Major intrinsic protein 16 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy3g0839 250 SUPERFAMILY Aquaporin-like 10 238 IPR023271 -
Ahy3g0839 250 Gene3D Glycerol uptake facilitator protein. 3 243 IPR023271 -
Ahy3g0839 250 PANTHER AQUAPORIN-8 4 242 IPR034294 -
Ahy3g0839 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0839 Ahy-Chr3 9471478 9472585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0839 6 247 Major Intrinsic Protein MIP AT3G47440 66.529 9.24e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0839 K09873 - gmx:100801448 395.201