Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0820 ATGGCTCCTTCTTCTTCTCCGATTGTTACTGATTCACTGGATCCATCAACACCTACCGAAACTCTTGACAACGATCTTCAGCCATTCTTTGTTCTTCACAAACCTTCATCCCGAAGAAAAGATAGATCATCAACAGGACAAGGTAAACAGCGAAAAAGAAATGAGCTGTCTTCGCCGCAGAACACAAAGAAACAGGAAGGAAGTGTGAACGAAGAATGTGACTACCATTTGTTTAAGCCGCTACAAATTGAAGCATTTAACAGTGTTTGGTCAAGAATCGAGTCCACCATTAAGGATGTTTTGAGAGATCTCAATTCTAGTGCGTTTAAAGACATACAACGATGGATTCTGGAGTGCTTCAATGCTGCTAGATTGCATGGAGAACCTAATATCACAGAAGCAACTCGATCCTTTCCTATTCTGAGTAATGCTACTCCTGGTCAACTGTCCACTGCATTGGTTATTACCAGAAATATAGAATTTGTTGATGATATATTGACCTTTGAAGAGCTCGGTCATTTCTTGAAATCCCATGGATGCCATGTAGCCAAGCTTTCTTCAGTGGATTTTTCAATGAAAAACGGAATTGCTGGTTGCTTAAAAGCTTTATTGCGAGAGTTTCCACTGGGTGAAATTGATTCAGCTGATATTTCAATCTTAGCATCATGGTATAGAGAACAAGACAACAACAATAAACCACTAGTGCTTATCATTAGTGATTTGGAAAGGTGTTGCGGATCTGTCTTAACGGAATTTGTCCTGATGTTGAGCGAATGGGTTGTCAAGTTACCAGTCATCTTAATAATTGGAGTTGCAACGACAGTAGATGCCCTAAGAAATGCTCTGCCATCTTGTGCTCTCCAATGCTTATGTTCCTCCAAGTTTATGATTGGAACACCAGATGAGAGAATGGATACAATTGTTGAGGCTGTTCTTGTGAAACATAGCACTACATTTAATATTGGTCATAAAGTGGCACTCTTTCTAAGAAATTACTTCATCAACCAAGATGGGACATTAACATCTTTTATAAGAGCTTTGAAGTTAGCATGTTTGTTACATTTCTCCATGGAACCGGTCTCTCTCATACATGGGCATATGCTGGCAGAAGACCAAAAGGATTGGATATCTGCATTGTCACCTGAGATTTTGTTGAAATACATGGATGAATTTCCATCATATGATAGGAGTCAAATTGCTAGTCAAGCTGGAAAGAGCATTGCCCAGGGTTTGTCAGATTTGATGACAGAGAAAAAGCTATGGAGCACCGCAGTTCTTTGCCTATGTGAAGCTGGAAAATATAGCAAAGTGCGACTGCTGGATTTGTTTTGCGAAGTGCTCAATCCAGATTTGTACCCGCATAGAGATTCTGTTTGTCACATCAGGAATGAAAAAGATCAAGGGTTGTCTTCAACAAATGGCCACAGTCAACAATACTCTTCCGTTCAAACCGGTGGTTTGATTCGCCAAATAGTTCGCAAAGTGAGGGATCTCCCTACAGGAGCGCTTGGTCAACTAATAAAGAGGTGGGAAAAACTTACCGCAGATATTTCCGAGATTCATGATAAATTGAAAACGTTTCAATCTTCAGTAAGATGTGAAGATAGAAGGAGTCCACGCAAGAGTTCCAAGGACATATCCAAGAGATATGGATCGAAAGCTTCATTAGACGCCGACAATGAGTTGACAATGTTAAACTTGCAAGCTGTTGCATTTATAGATTGCTTAGTTAGAAATTATATGAGGCCAATCGAATGCATGCCTTTTCATGAAATTTCCTGCTTCAAGAATGTTGAGAAGCTTCAAGTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGCTGATCTGTTGGATTCACATAAGATTTTAAGGTGCAGTTGCTGTAATAAAACTGGCAATGCCCTATTGCCATCAAGACAGGATTCCTCAATTCTGTATTCCCTGGCTCAAGAGCATGGAGATCTTATCAATCTTCACGATTGGTTCCAGTCTTTTAGAACAATTCTTCACCAAACAAATAAACGGAAACCAAAGTCAAAGCAGTCACCCCAGCCAAAGAAGAGAAAAGATACAGCTGGATCTGGAGACCAAAATGAAGCATCAATCCAAGCACGCTTTTGCAGAGCAGTTACAGAAATGCAGATCACCGGGCTGCTTAGAATGCCAAGCAAGCGGCGCCCGGATTTTGTACAAAGAGTAGCATTTGGACTTTGA 2217 0.4037 MAPSSSPIVTDSLDPSTPTETLDNDLQPFFVLHKPSSRRKDRSSTGQGKQRKRNELSSPQNTKKQEGSVNEECDYHLFKPLQIEAFNSVWSRIESTIKDVLRDLNSSAFKDIQRWILECFNAARLHGEPNITEATRSFPILSNATPGQLSTALVITRNIEFVDDILTFEELGHFLKSHGCHVAKLSSVDFSMKNGIAGCLKALLREFPLGEIDSADISILASWYREQDNNNKPLVLIISDLERCCGSVLTEFVLMLSEWVVKLPVILIIGVATTVDALRNALPSCALQCLCSSKFMIGTPDERMDTIVEAVLVKHSTTFNIGHKVALFLRNYFINQDGTLTSFIRALKLACLLHFSMEPVSLIHGHMLAEDQKDWISALSPEILLKYMDEFPSYDRSQIASQAGKSIAQGLSDLMTEKKLWSTAVLCLCEAGKYSKVRLLDLFCEVLNPDLYPHRDSVCHIRNEKDQGLSSTNGHSQQYSSVQTGGLIRQIVRKVRDLPTGALGQLIKRWEKLTADISEIHDKLKTFQSSVRCEDRRSPRKSSKDISKRYGSKASLDADNELTMLNLQAVAFIDCLVRNYMRPIECMPFHEISCFKNVEKLQVVLIGDPRRRIQADLLDSHKILRCSCCNKTGNALLPSRQDSSILYSLAQEHGDLINLHDWFQSFRTILHQTNKRKPKSKQSPQPKKRKDTAGSGDQNEASIQARFCRAVTEMQITGLLRMPSKRRPDFVQRVAFGL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0820 738 MobiDBLite consensus disorder prediction 1 24 - -
Ahy3g0820 738 MobiDBLite consensus disorder prediction 673 700 - -
Ahy3g0820 738 MobiDBLite consensus disorder prediction 34 49 - -
Ahy3g0820 738 MobiDBLite consensus disorder prediction 50 66 - -
Ahy3g0820 738 Pfam Origin recognition complex winged helix C-terminal 610 736 IPR040855 -
Ahy3g0820 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 229 362 IPR045667 -
Ahy3g0820 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 71 205 IPR045667 -
Ahy3g0820 738 MobiDBLite consensus disorder prediction 1 69 - -
Ahy3g0820 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 18 737 - -
Ahy3g0820 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 18 737 IPR020795 GO:0003677|GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0820 Ahy-Chr3 9241942 9255430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0820 1 670 Core DNA Replication Machinery Family AT5G16690 46.018 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0820 K02605 - gmx:100780646 1058.51