Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0818 ATGATCCAGAACGCTGATATGAAACTCGAGTCAGGGACTTGTAACGTTTGCTCAGCTCCTTGTTCGTCCTGCATTCATCTTAGTCGAGCTCTCACTCGACCAAAGGCCAAAGAGTTCTCTGATGAAAATTGTCACTTGGGGGAGGCCAATCAGTTTTCTACGGATGAGGGTGATCAATCTTCTCGTAGGAGCAGAACTTGTGAAAGATTGAATCATGCTAGCAGTGGAACCGGTAACATGCTTAGTGTTAATTCCAGTCATGAATCTCTGTCTGAAAATGCTGAAAGCACACGAGTTTTATCAGAGAAGTACCGGGATGCCAAATTTTTAGAAGGTCTTGATGACAATGCTTCTTGTATCAGTAGAACCAGTGATGCTGATTTAATACCTGTTATTAATGGCAATACTGCTGTGCTTTTGACAAGAGTATATCCAAAGTCAGAATCAGATTCAGATAGTGATGTTGGTAATGTGAAAGACAAAAATCATAAAGTTCCAGTCCGTGATGGACTGCATGAGAAGCAAGGGGAGCAGGTTAAATCACCAGTCAAGCCTGAAGCTCACTCTGAAGATGAGAGTGATGACTCAGATGTTGAGCATGATGTAAAAGTTTGTGACATCTGTGGGGATGCTGGTCGGGAGGAGCTGCTTGCAGTATGTAGCAGGTGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTTGAAAAGGTTCCAGAAGGAGACTGGTTATGTGAAGAATGCAAGTATGCTCAGGAGACTGAAAATCAAAAGCTGGGTAAAATTAATTCAACTGCACTTATCTCTGGAAAAAGGCCTCTTGAAAGTGAAGAATTGGCTAAGGCAGCAAAAAAGCAAGCTCTTGAGTCAAACATTGGGTCACCAAAGGGTTCAAGCCCCAAGAGAGTATTTCCACTGTCACGAGAGTCTTCATTCAAGAACCTTGATAAGGGAAAGTTGAAGTCTGGTTACCACAGCTCCATTTGTAATCACCCTGATGGCAGTGACAGAGAACTTGCTCGCTCTCTTTCAGCTGGTCCTCGAAGTCAAACAACAAAGAGTACATTGTTGAAGTCAAATTCATTCACTACGAATTCCAACCCAAGAGTCAAACTTGTTGATGAAGTCCCGCAAAAGAAGAAAGGGGGCAGCGAACATGCTTCTAAGGATAGCGAGGCACCAAGGCAAATAATTAGCAAATCTACATCATTCAAATCATCAAATTTGAGCAGTTCGAATGCCACTGAATCAAAAGTTAAAATGCTTACTTCTAAGTCTGGAACAACACAGGACCTGAAAGGATCAAGACTAACAAAAGAATCTGACAGGAAATTTCTCTCTAGGGTTGATCAGCCTGTGGTTTGTTCAACCATTTCCAAACCTATAGGTGACCATAAGCTTTCTCCTCATGGTGAGACCAGTAAACCTTCTGCAGTTAACAATCGAGAGCGTAAGGTCAACCCAGATGTGAGATCAAATTCATTATCTAAGTCTAAGAATAATATAAACCGCAAGAGTTCGGCACCTTTATTTAGTGCAGAAAGAATAGCAACCAGTGGTGAAGAAACTCAATTGGATGGGGCGCCTCAATCAATAGAATTTTCAAATCAAATTGATAATGCCAAAGATAGTTCTATTGATCATGTGAGCTCTGGTCTTACTAATGCCTCTGGAAGCTCAGTCTTTCACAAAAGTAAGGATTTTGGCCATGCAACAGAATGTCGTGGGGTTGCTAATAGAGAAGAATTCAGCCTCGAAGGATCAACCACTGCCCCAAACAGTTCAAAAGACAAGATACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATATGCAAGAAGAAAGAAGTACCTGATCGAACTGATGAATTTTCTACATCAGGCAGAGACTTGAATTCCGAAGTCAGTTCTCAGGATCAGTCGATTGTTATCAACACACAAAAGAATATTCTTTCTACTGAAGAAACAAAAGCGAGGCAGGAGATCCTTCACAACCCAACATTTGAAACTCCATCTTCCAATGGTTCGAAGCCAGTTAGCTTTGGTCCAATACAGCCAAGAAAGTTAGAATCTGTTGGTCCTGATCCTGGAAATCCTGTAGTGAGAGATTTCCAGAATCAAGCTTTGGCTGTCTCAAGTGTTCTTTCACAGATAGCAGTCTTTCCAGAACATCAATTCATCTGGCAAGGTGTCTTTCAAGTGCACAGATATGGAAAGCTACCTAACTTGTATACTGGAATTCAAGCACATTTATCCACATGTGCATCCCCCAAGGTTCTTGAGGTAGTGAACAAGTTTCTACCTGAAGTTTCCCTCGATGAAGTTTCTCGCTTGAGCACTTGGCCTTCACAATTTCATCAAGGCGGGGCTAGGGAAGATAATATCGCTCTTTACTTTTTTGCCGAAGACATTGAAAGTTATAGGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAAGTTTTGATGGTGTTGAACTTCTCATATTCCCATCTAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGCTGTTTTTCTTATGGGGTGTATTTAGAGGACATAGGATGAATAATTTTGACTCTGCAAGAAAGGTTTGTATTCCCAGTTTGAACGCGGTGCCAGTTGAGAAGGATTTTCCAACTTCTGTCATGAATTTGTCTGAAACCCACAGCTCACTGAAGCGGATGGATGAACAATCAATTGCTTGTGGTAGAACATGCAGTGCAGTTCTCCCTTCCACTTCCATAGGTGAAGGCCCTAATGTTTTCCATGGGGATTTTGATATCAAAGAAACTAGTGATGAGGCATGTTTGGCTTCACAAGTAAACTTACATAGGCAAGATAGTAGAATCAACACTAAATCTACATTGGAGATTCCTTCAAGCAGTGGTCAGTTGTGCCAAGAATTGCATTCCGCAGGTTCATCCCCGAAAGATGGACAGCAGAGAGTCCCCACACCTCCTGAAGCAATGAGAACACTTGTAAGTAACTGGATTGTGGAAACAAATAGTGACTATGATATTTCAGTCAAGCAAGAGAACTCTCTGTCTTCAGGGATTCCTTCTGCCGAGAAACAAGAGACAGATGCTGCAAGCAATACCTCTGAAAATCAAATTTCAGAGAGAATTAACCATGATGAAGATCAACATAGGCCTAAAAGGAAACTGATAGAAGAAGATCTCAATATTAGCATAGAGGCAACGCTTCAAGAAGACCCATCTATAACAATCATAAACTGTCAGCAAACTAATGATAAAAAAGTTCAGCATATAGATGTTTCAAATGCAGTTTTGAAGGCTTCCACAGATAGTTATCAGAAATTGCCTTGGGATAAGGTGAATGGAAAATTGGAAGATGGAGAAAGTTCCAGCAAGAAGCTCAAGTCAGGTTTAACTGATATTTATGGAAGTTGTAGTTCAGGAGGTAGGGAATCTTCCAATGGCAGTTTTACGGGCCGTGCAAACCATCCTGGTACCTTCTCTTCAGTTGAGGACCTTGGAACCATGGAAAGAACCTTCTTTCCTGTTGATTCGCATAAGAAAAATGACTCGCAATTGATGCTCAACGGCATGCCACTGGAGGGGTCTTGTGAGTATGAGGGTCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGCTTTGGGGGGCAAAATAAAACCACAGCCACTGCCAGTTCCAGCGCCGCCCCATAAGGGTATGTTCCCTTTTCTCGTCGGAGCTGTAGACAAGAAAAATAACCAGAAAAAACCACCTGAAGTAGTTGGGGATGAGCAAGAGGGCGACAACAGTGTTGCTGCATCTCTTTCCCTGTCTCTATCATTCCCATCATCGAATAAGGAACCTGTCAAACCTGCTCCAAAAGCTGAACATTCGACTGATGGGCATCATGTGAATACTCCGTTTCTCCTTTTTGGGAGATACACAGACAAATAA 3987 0.4191 MIQNADMKLESGTCNVCSAPCSSCIHLSRALTRPKAKEFSDENCHLGEANQFSTDEGDQSSRRSRTCERLNHASSGTGNMLSVNSSHESLSENAESTRVLSEKYRDAKFLEGLDDNASCISRTSDADLIPVINGNTAVLLTRVYPKSESDSDSDVGNVKDKNHKVPVRDGLHEKQGEQVKSPVKPEAHSEDESDDSDVEHDVKVCDICGDAGREELLAVCSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAQETENQKLGKINSTALISGKRPLESEELAKAAKKQALESNIGSPKGSSPKRVFPLSRESSFKNLDKGKLKSGYHSSICNHPDGSDRELARSLSAGPRSQTTKSTLLKSNSFTTNSNPRVKLVDEVPQKKKGGSEHASKDSEAPRQIISKSTSFKSSNLSSSNATESKVKMLTSKSGTTQDLKGSRLTKESDRKFLSRVDQPVVCSTISKPIGDHKLSPHGETSKPSAVNNRERKVNPDVRSNSLSKSKNNINRKSSAPLFSAERIATSGEETQLDGAPQSIEFSNQIDNAKDSSIDHVSSGLTNASGSSVFHKSKDFGHATECRGVANREEFSLEGSTTAPNSSKDKIHKDNRLKAAIQAALLRRPEICKKKEVPDRTDEFSTSGRDLNSEVSSQDQSIVINTQKNILSTEETKARQEILHNPTFETPSSNGSKPVSFGPIQPRKLESVGPDPGNPVVRDFQNQALAVSSVLSQIAVFPEHQFIWQGVFQVHRYGKLPNLYTGIQAHLSTCASPKVLEVVNKFLPEVSLDEVSRLSTWPSQFHQGGAREDNIALYFFAEDIESYRRHYKGLLDHMIRNDLALKGSFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGHRMNNFDSARKVCIPSLNAVPVEKDFPTSVMNLSETHSSLKRMDEQSIACGRTCSAVLPSTSIGEGPNVFHGDFDIKETSDEACLASQVNLHRQDSRINTKSTLEIPSSSGQLCQELHSAGSSPKDGQQRVPTPPEAMRTLVSNWIVETNSDYDISVKQENSLSSGIPSAEKQETDAASNTSENQISERINHDEDQHRPKRKLIEEDLNISIEATLQEDPSITIINCQQTNDKKVQHIDVSNAVLKASTDSYQKLPWDKVNGKLEDGESSSKKLKSGLTDIYGSCSSGGRESSNGSFTGRANHPGTFSSVEDLGTMERTFFPVDSHKKNDSQLMLNGMPLEGSCEYEGQFQVGIPNLELALGGKIKPQPLPVPAPPHKGMFPFLVGAVDKKNNQKKPPEVVGDEQEGDNSVAASLSLSLSFPSSNKEPVKPAPKAEHSTDGHHVNTPFLLFGRYTDK* 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0818 1328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 272 IPR013083 -
Ahy3g0818 1328 PANTHER - 141 1078 - -
Ahy3g0818 1328 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 141 1078 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 974 1005 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 396 436 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 974 1000 - -
Ahy3g0818 1328 SMART PHD_3 204 251 IPR001965 -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 1031 1069 - -
Ahy3g0818 1328 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 129 - -
Ahy3g0818 1328 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1080 1319 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 467 492 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 1031 1057 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 1280 1296 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 1264 1317 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 627 649 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 375 395 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 70 94 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 147 191 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 146 197 - -
Ahy3g0818 1328 SUPERFAMILY FYVE/PHD zinc finger 190 257 IPR011011 -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 346 373 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 493 510 - -
Ahy3g0818 1328 PANTHER - 7 129 - -
Ahy3g0818 1328 PANTHER - 1080 1319 - -
Ahy3g0818 1328 MobiDBLite consensus disorder prediction 288 511 - -
Ahy3g0818 1328 ProSiteProfiles Zinc finger PHD-type profile. 202 253 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0818 Ahy-Chr3 9210514 9217789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0818 205 298 Core DNA Replication Machinery Family AT4G14700 29.787 3.60e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0818 - - ahf:112789342 2578.51