Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0813 ATGGCTACCACTTCACAAGTTATTACCTGCAAAGGAGTAGTGTGCTGGGTTGGTGGAGAGCCTGTAAGATTAGAAGAGATTCAAGTTGATCCACCAAAATCAACTGAAATTCGAGTTAAGATGCTTTGTTCCAGCATCTGCCACACTGATATCAAAAGAATTAGAGGATCCCCAGTAGTGAAGTATCCTCTTGCTGTTGGACATGAAGGAGTCGGTGTTGTAGAGAGTGTTGGAGAGGAAGTAAAAAATCTGAAAGAAGGGGATATGGTGATTCCAACCTTCATAGGAGAGTGCAAACAATGTGAGATTTGCATTTCAGGAAAATCCAATTTGTGCATGACAAACCCTTTAATGCTCAATGGATTGATGAGAGACAACACTTCAAGGTTGTCCTGCAAAGGCAAAAGGCTTCACCATATTTTCAGTTGTGCCACTTGGTCAGAGTACATGGTTGTTGATGCCAACTATGCTCTTAAAGTTGATCCAAGCATTGACCTAGCACATGCCAGTTTCATCTCATGTGGCTTTTCAACTGGTTATGGTGCTGCTTGGAAGGAAGCTAAGGTTGAAAGTGGATCAAGTGTTGCTGTTTTTGGTCTTGGCGCTGTTGGATTGGGGGCCATCAGCGGAGCAAAAATGATGGGAGCAACTAAGATAATAGGGATTGACAAAAATGATATGAAAAGAGAAAAAGGAGAAACTTTTGGGATGACTCACTTTATAAATCCTAGTGATTCTGATATGCCTGCATCAGAATTGGTGAAAGAATTGAGTGATGGAAGAATGGGTGTGGATTATTCTTTTGAGTGCACTGGAATCAGCCATTTGATTATTGAATCCCTACAAGCCACAAAAGTGGGAACAGGTAAAACAATTGTAATTGGTGCACCAACTGAACCAATTGAGCCATTTGGTTTTGCTTCAATCCTTAAAGGCAAGACTTTGAAAGGTTCTATCTTTGGAGGGTTAAAAGCAAATTCAGACCTTTCCATTATAGCTGACAAATGCCACAAAAGGGAATTTCCTCTTGAAGAATTATACACTCATGAGGTTCAATTGGCAGATATAAATCAAGCATTTGAGCTTTTGAAACAGCCCAATTGTGTGAAAGTTGTCATCAAGATATAA 1128 0.4016 MATTSQVITCKGVVCWVGGEPVRLEEIQVDPPKSTEIRVKMLCSSICHTDIKRIRGSPVVKYPLAVGHEGVGVVESVGEEVKNLKEGDMVIPTFIGECKQCEICISGKSNLCMTNPLMLNGLMRDNTSRLSCKGKRLHHIFSCATWSEYMVVDANYALKVDPSIDLAHASFISCGFSTGYGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKMMGATKIIGIDKNDMKREKGETFGMTHFINPSDSDMPASELVKELSDGRMGVDYSFECTGISHLIIESLQATKVGTGKTIVIGAPTEPIEPFGFASILKGKTLKGSIFGGLKANSDLSIIADKCHKREFPLEELYTHEVQLADINQAFELLKQPNCVKVVIKI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0813 375 SUPERFAMILY GroES-like 3 190 IPR011032 -
Ahy3g0813 375 Gene3D - 14 370 - -
Ahy3g0813 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Ahy3g0813 375 Pfam Zinc-binding dehydrogenase 202 323 IPR013149 -
Ahy3g0813 375 PANTHER ALCOHOL DEHYDROGENASE 5 374 - -
Ahy3g0813 375 SMART PKS_ER_names_mod 18 373 IPR020843 GO:0016491
Ahy3g0813 375 CDD liver_alcohol_DH_like 8 374 - -
Ahy3g0813 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Ahy3g0813 375 Gene3D - 179 318 - -
Ahy3g0813 375 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 374 - -
Ahy3g0813 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 332 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0813 Ahy-Chr3 9158093 9161728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0813 35 367 Monolignol Biosynthesis Gene Families AT2G21730 25.519 5.54e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0813 K00121 - gmx:100798341 556.599