Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0812 ATGACAAACACTTCAAAGGTCATTACATGCAAAGGTGCTGTTTGTTGGGGTGCTGGTGAAGCTGTGAGATTAGAAGAGATACAAGTTGATCCACCAAAAGCAAATGAAGTTCGAGTCAAGATGATTTGTGCTAGCATCTGCCACACTGATATCACCTCCATTCAAGGATTATTACCATTTTTTCGTTATCCAATAGCTCTTGGTCACGAAGGAGTTGGGGTTGTGGAATCAGTTGGAGATGGAGTCACAAATCTAAAAGAAGGGGATATGGTGATTCCAACATACATAGGAGAGTGCCAAGAATGTGAGAATTGCATTTCAGGAAAATCAAACTTGTGCTTAACATATCCTATGAGGATCAGTGGCTTGATGCCAGATAACACTTCAAGATTGTCCTGCAAAGGCAACAACTTATATTACTGTTTAACTTTCGCCACGTGGTCCGAGTACACGGTTATCGATGTTAACTACCTCATTAAGGTTGATCCAATCATTAATCCAGCTCATGCCAGCTTCATCTCATGTGGATTCTCAACTGGCTATGGAGCTGCATGGAGAGAAGCCAAAGTTCAAAGTGGATCAAGTGTTGTTGTTTTTGGCCTTGGTGCTGTTGGATTAGGGGCTATAAGTGGAGCAAAAACTTTGGGGGCAAAAACGATAATAGGAATTGACACAAATAACTTGAAGAGAGAAAAAGGAGAAGCATTTGGAATGACTCACTTTATAAATCCAAATGATTCTGATAAATCTCCTTCAACATTGGTGAAAGAATTGAGTGATGGATTTGGTGTGGATTATTCATTTGAGTGCACTGGAGTTGCCCCTTTGCTCACTGAATGCTTAGAAGCCACAAAAATGGGAAGTGGTAAGGCAATATCAATTGGAGCAGGAAATGAAGCTACTGTGCCCCTTGGTCATTTGTCACTTCTTTTTGGCAGAACTTTGAAAGGTTCTATTTTTGGAGGGCTTAAAGCCATTTCAGATCTTTCTATTATAGCTGACAAGTGCCTGAAGCAGGAGTTTCCTCTTGAAGAATTACACACCCATGAGGTTCAATTGGAAGATGTAAACGAAGCATTTGAGTTGTTGAAACAGCCCAACTGTGTAAAAATTGTCATCAAGATGTGA 1128 0.4043 MTNTSKVITCKGAVCWGAGEAVRLEEIQVDPPKANEVRVKMICASICHTDITSIQGLLPFFRYPIALGHEGVGVVESVGDGVTNLKEGDMVIPTYIGECQECENCISGKSNLCLTYPMRISGLMPDNTSRLSCKGNNLYYCLTFATWSEYTVIDVNYLIKVDPIINPAHASFISCGFSTGYGAAWREAKVQSGSSVVVFGLGAVGLGAISGAKTLGAKTIIGIDTNNLKREKGEAFGMTHFINPNDSDKSPSTLVKELSDGFGVDYSFECTGVAPLLTECLEATKMGSGKAISIGAGNEATVPLGHLSLLFGRTLKGSIFGGLKAISDLSIIADKCLKQEFPLEELHTHEVQLEDVNEAFELLKQPNCVKIVIKM* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0812 375 Gene3D - 14 370 - -
Ahy3g0812 375 PANTHER ALCOHOL DEHYDROGENASE 5 374 - -
Ahy3g0812 375 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
Ahy3g0812 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Ahy3g0812 375 SUPERFAMILY GroES-like 4 191 IPR011032 -
Ahy3g0812 375 Gene3D - 180 318 - -
Ahy3g0812 375 SMART PKS_ER_names_mod 17 373 IPR020843 GO:0016491
Ahy3g0812 375 Pfam Zinc-binding dehydrogenase 203 322 IPR013149 -
Ahy3g0812 375 SUPERFAMILY GroES-like 327 373 IPR011032 -
Ahy3g0812 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 334 IPR036291 -
Ahy3g0812 375 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 374 - -
Ahy3g0812 375 CDD liver_alcohol_DH_like 8 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0812 Ahy-Chr3 9155054 9157555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g0812 35 367 Monolignol Biosynthesis Gene Families AT2G21730 27.193 2.66e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0812 K00121 - gmx:100798341 557.755